BLASTX nr result

ID: Glycyrrhiza23_contig00025957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025957
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A...    76   2e-12
gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]        72   5e-11
ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glyci...    72   5e-11
gb|ACU16457.1| unknown [Glycine max]                                   72   5e-11
gb|AFK49375.1| unknown [Medicago truncatula]                           69   4e-10

>sp|Q40191.1|RB11A_LOTJA RecName: Full=Ras-related protein Rab11A; Flags: Precursor
           gi|1370142|emb|CAA98177.1| RAB11A [Lotus japonicus]
          Length = 226

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = +1

Query: 1   AADESQGTGNSASLSGQKIIIPGPAQEIPAKRIMCCQAS 117
           AADESQG GNSASLSGQKIIIPGPAQEIPAKR MCCQAS
Sbjct: 188 AADESQGNGNSASLSGQKIIIPGPAQEIPAKRNMCCQAS 226


>gb|AAB97114.1| small GTP-binding protein, partial [Glycine max]
          Length = 222

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +1

Query: 4   ADESQGTGNSASLSGQKIIIPGPAQEIPAKRIMCCQAS 117
           ADE+QG GNSASLSGQKII+PGPAQEIPAKR MCCQ+S
Sbjct: 185 ADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 222


>ref|XP_003525046.1| PREDICTED: ras-related protein Rab11A [Glycine max]
          Length = 229

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +1

Query: 4   ADESQGTGNSASLSGQKIIIPGPAQEIPAKRIMCCQAS 117
           ADE+QG GNSASLSGQKII+PGPAQEIPAKR MCCQ+S
Sbjct: 192 ADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 229


>gb|ACU16457.1| unknown [Glycine max]
          Length = 229

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +1

Query: 4   ADESQGTGNSASLSGQKIIIPGPAQEIPAKRIMCCQAS 117
           ADE+QG GNSASLSGQKII+PGPAQEIPAKR MCCQ+S
Sbjct: 192 ADENQGNGNSASLSGQKIIVPGPAQEIPAKRNMCCQSS 229


>gb|AFK49375.1| unknown [Medicago truncatula]
          Length = 225

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/38 (86%), Positives = 34/38 (89%)
 Frame = +1

Query: 1   AADESQGTGNSASLSGQKIIIPGPAQEIPAKRIMCCQA 114
           AADESQG GNSASL GQKIIIPGPAQEIPAK  MCCQ+
Sbjct: 188 AADESQGNGNSASLLGQKIIIPGPAQEIPAKSNMCCQS 225


Top