BLASTX nr result

ID: Glycyrrhiza23_contig00025943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025943
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543816.1| PREDICTED: 50S ribosomal protein L7/L12-like...    93   3e-17
ref|XP_003555654.1| PREDICTED: 50S ribosomal protein L7/L12-like...    92   3e-17
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...    76   2e-12
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...    70   2e-10
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...    70   2e-10

>ref|XP_003543816.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 161

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 56/121 (46%), Positives = 65/121 (53%)
 Frame = +2

Query: 68  SRSSIRLFKHIRSLSTEARTQKVERIADELLNLNRFERHDFTLLWRLKLGLDRYGASVPG 247
           +RS+ RL    R+LSTEAR QK+ERIA ELL+LN FERHDFT+LWRLK+GL RYGA V G
Sbjct: 10  TRSATRLLNLTRALSTEARGQKIERIATELLDLNSFERHDFTVLWRLKMGLHRYGAPVAG 69

Query: 248 LGPLGPXXXXXXXXXXXXXXXXXXXXXXXFDXXXXXXXXXXXXXXXXXVRAFTDLGLKEA 427
           +                            FD                 VR+FTDLGLKEA
Sbjct: 70  M-----TMPSVGAAARAEAGAAAVAEKMAFDLKLEKYDAAAKIKIIKEVRSFTDLGLKEA 124

Query: 428 K 430
           K
Sbjct: 125 K 125


>ref|XP_003555654.1| PREDICTED: 50S ribosomal protein L7/L12-like [Glycine max]
          Length = 159

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 58/122 (47%), Positives = 67/122 (54%)
 Frame = +2

Query: 65  MSRSSIRLFKHIRSLSTEARTQKVERIADELLNLNRFERHDFTLLWRLKLGLDRYGASVP 244
           +++S+ RLF   R+LS EAR QKVERIA ELLNLNRFERHDFT+LWRLK+GL RY A+ P
Sbjct: 9   VTKSATRLFNLTRALSIEAREQKVERIATELLNLNRFERHDFTVLWRLKMGLHRYDAA-P 67

Query: 245 GLGPLGPXXXXXXXXXXXXXXXXXXXXXXXFDXXXXXXXXXXXXXXXXXVRAFTDLGLKE 424
             G   P                       FD                 VR+FTDLGLKE
Sbjct: 68  VAGVATP------SVVGAKVGASVAVEKTAFDLKLEKYDAAAKIKIIKEVRSFTDLGLKE 121

Query: 425 AK 430
           AK
Sbjct: 122 AK 123


>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 48/113 (42%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
 Frame = +2

Query: 98  IRSLST--EARTQKVERIADELLNLNRFERHDFTLLWRLKLGLDRYGASVPGLGPLGPXX 271
           +RSLST  E RTQK+ERIADELL+L + ERHD+ +L+R K+GL++YG +V GL   G   
Sbjct: 26  VRSLSTVAEERTQKLERIADELLDLTKIERHDYAILFRYKMGLNKYGPAVSGLSAPG--- 82

Query: 272 XXXXXXXXXXXXXXXXXXXXXFDXXXXXXXXXXXXXXXXXVRAFTDLGLKEAK 430
                                FD                 VR FTDLGLKEAK
Sbjct: 83  ---SAAAGSAAAETKEAEKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAK 132


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 44/107 (41%), Positives = 56/107 (52%)
 Frame = +2

Query: 110 STEARTQKVERIADELLNLNRFERHDFTLLWRLKLGLDRYGASVPGLGPLGPXXXXXXXX 289
           S EART+K+ERIAD+LLNLNR E +D+++L+  KLGL+RYG++V   G  G         
Sbjct: 34  SPEARTKKLERIADDLLNLNRIELYDYSILFSHKLGLNRYGSAVAVAGSDG--------- 84

Query: 290 XXXXXXXXXXXXXXXFDXXXXXXXXXXXXXXXXXVRAFTDLGLKEAK 430
                          FD                 +RAFTDLGLKEAK
Sbjct: 85  EASGSTETKTAEKTAFDVKLEKFETASKIKVIKEIRAFTDLGLKEAK 131


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
 Frame = +2

Query: 89  FKHIRSL-STEARTQKVERIADELLNLNRFERHDFTLLWRLKLGLDRYGASVPGLGPLGP 265
           F   R+L S  A TQK+ERIADELL+L + ER+D+++L+RLKLGL++YG +V GL     
Sbjct: 19  FAQSRNLCSASATTQKLERIADELLDLTKLERYDYSILFRLKLGLNKYGPAVSGLA---- 74

Query: 266 XXXXXXXXXXXXXXXXXXXXXXXFDXXXXXXXXXXXXXXXXXVRAFTDLGLKEAK 430
                                  FD                 VR FTDLGLKEAK
Sbjct: 75  SADSASAGSGSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAK 129


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