BLASTX nr result

ID: Glycyrrhiza23_contig00025940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025940
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like ...   394   e-107
ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago t...   389   e-106
gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago trun...   389   e-106
ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transp...   273   3e-71
emb|CAN75802.1| hypothetical protein VITISV_016976 [Vitis vinifera]   273   3e-71

>ref|XP_003551779.1| PREDICTED: auxin transport protein BIG-like [Glycine max]
          Length = 5112

 Score =  394 bits (1012), Expect = e-107
 Identities = 197/239 (82%), Positives = 209/239 (87%)
 Frame = -2

Query: 719  EQPPAAALVSNSSNQNMPIQAAIELLNFLKTCIFSTEWHPSLYVDACNKXXXXXXXXXXX 540
            EQ P AAL+S+SS QNMP QAAIELLNFLKTCIFS EWHPSLYVDACNK           
Sbjct: 524  EQAPVAALISSSSYQNMPTQAAIELLNFLKTCIFSAEWHPSLYVDACNKLSSRDIDILLS 583

Query: 539  XLNCHGCCSEDYMSDSCIPSHEDGKIGHIHELCFDLLQNLLTNHALNDSLEDYLVEKILT 360
             LNC GCCSED +SDSC P   DGKIGHIH+LCFD+L NLLT+HALNDSLEDYLV+KILT
Sbjct: 584  LLNCQGCCSEDNISDSCTPLLVDGKIGHIHDLCFDILHNLLTSHALNDSLEDYLVDKILT 643

Query: 359  VENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSINDL 180
            VENG+FSYNDRTLTLLAHTLF RVGS+GSQLRTKICR YVAFVVEKAKTVC+ CPSINDL
Sbjct: 644  VENGSFSYNDRTLTLLAHTLFCRVGSSGSQLRTKICRVYVAFVVEKAKTVCINCPSINDL 703

Query: 179  VGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVVS 3
            VGTLPSLFHIEVVLMAFHLSSEGEKAVMA LI+STLKEVA+L LDLNST LTCWALVVS
Sbjct: 704  VGTLPSLFHIEVVLMAFHLSSEGEKAVMAKLIFSTLKEVASLILDLNSTHLTCWALVVS 762


>ref|XP_003621559.1| E3 ubiquitin-protein ligase UBR4 [Medicago truncatula]
            gi|355496574|gb|AES77777.1| E3 ubiquitin-protein ligase
            UBR4 [Medicago truncatula]
          Length = 5158

 Score =  389 bits (998), Expect = e-106
 Identities = 197/239 (82%), Positives = 210/239 (87%)
 Frame = -2

Query: 719  EQPPAAALVSNSSNQNMPIQAAIELLNFLKTCIFSTEWHPSLYVDACNKXXXXXXXXXXX 540
            EQPPAAALVSNSSNQNMPIQ+AIELLNFLKTCIFSTEWHPSL+VDAC+K           
Sbjct: 581  EQPPAAALVSNSSNQNMPIQSAIELLNFLKTCIFSTEWHPSLFVDACSKLSNTDIDILLS 640

Query: 539  XLNCHGCCSEDYMSDSCIPSHEDGKIGHIHELCFDLLQNLLTNHALNDSLEDYLVEKILT 360
             L+ HGC SED MSD+CIPSHEDGK+G IHEL FDLL NLLTNHAL+DSLEDYLVEKIL 
Sbjct: 641  LLDSHGCWSEDNMSDACIPSHEDGKVGIIHELSFDLLHNLLTNHALSDSLEDYLVEKILI 700

Query: 359  VENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSINDL 180
            VENGAFSYNDRTLTLLAH LF+RVGS GSQLRTKI RGYVAFVVEKAK+VCV CPSIN+L
Sbjct: 701  VENGAFSYNDRTLTLLAHALFSRVGSVGSQLRTKIFRGYVAFVVEKAKSVCVNCPSINEL 760

Query: 179  VGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVVS 3
            VGTLPSLFHIEVVLMAFHLS   EK VMA+LI+STLKEVAN  LDLNS+LLTCWALVVS
Sbjct: 761  VGTLPSLFHIEVVLMAFHLSCAEEKGVMANLIFSTLKEVANPVLDLNSSLLTCWALVVS 819


>gb|ABN07919.1| Zinc finger, N-recognin; WD40-like [Medicago truncatula]
          Length = 2165

 Score =  389 bits (998), Expect = e-106
 Identities = 197/239 (82%), Positives = 210/239 (87%)
 Frame = -2

Query: 719  EQPPAAALVSNSSNQNMPIQAAIELLNFLKTCIFSTEWHPSLYVDACNKXXXXXXXXXXX 540
            EQPPAAALVSNSSNQNMPIQ+AIELLNFLKTCIFSTEWHPSL+VDAC+K           
Sbjct: 465  EQPPAAALVSNSSNQNMPIQSAIELLNFLKTCIFSTEWHPSLFVDACSKLSNTDIDILLS 524

Query: 539  XLNCHGCCSEDYMSDSCIPSHEDGKIGHIHELCFDLLQNLLTNHALNDSLEDYLVEKILT 360
             L+ HGC SED MSD+CIPSHEDGK+G IHEL FDLL NLLTNHAL+DSLEDYLVEKIL 
Sbjct: 525  LLDSHGCWSEDNMSDACIPSHEDGKVGIIHELSFDLLHNLLTNHALSDSLEDYLVEKILI 584

Query: 359  VENGAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSINDL 180
            VENGAFSYNDRTLTLLAH LF+RVGS GSQLRTKI RGYVAFVVEKAK+VCV CPSIN+L
Sbjct: 585  VENGAFSYNDRTLTLLAHALFSRVGSVGSQLRTKIFRGYVAFVVEKAKSVCVNCPSINEL 644

Query: 179  VGTLPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVVS 3
            VGTLPSLFHIEVVLMAFHLS   EK VMA+LI+STLKEVAN  LDLNS+LLTCWALVVS
Sbjct: 645  VGTLPSLFHIEVVLMAFHLSCAEEKGVMANLIFSTLKEVANPVLDLNSSLLTCWALVVS 703


>ref|XP_003633742.1| PREDICTED: LOW QUALITY PROTEIN: auxin transport protein BIG-like
            [Vitis vinifera]
          Length = 6279

 Score =  273 bits (698), Expect = 3e-71
 Identities = 139/236 (58%), Positives = 171/236 (72%), Gaps = 1/236 (0%)
 Frame = -2

Query: 707  AAALVSNSSNQ-NMPIQAAIELLNFLKTCIFSTEWHPSLYVDACNKXXXXXXXXXXXXLN 531
            A A V+ +SN  NMPIQAA E+L FLK C FS EWH S+Y D C K            LN
Sbjct: 1681 APASVNPTSNYCNMPIQAASEVLGFLKDCAFSPEWHTSVYEDGCKKLSGKHIDILLSILN 1740

Query: 530  CHGCCSEDYMSDSCIPSHEDGKIGHIHELCFDLLQNLLTNHALNDSLEDYLVEKILTVEN 351
            C GC SED +SD+     E  K GH+HELCF+LL NLLT HAL+DSLE+YL  +IL V++
Sbjct: 1741 CQGCYSEDRISDNLTGLQEQRKTGHVHELCFELLHNLLTRHALSDSLEEYLFGQILNVDS 1800

Query: 350  GAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSINDLVGT 171
            G F YND TLTLLAH+L  RVG AGSQLR+KI RGY+ F+VEK K +  KCPS+ +L GT
Sbjct: 1801 GCFIYNDLTLTLLAHSLICRVGLAGSQLRSKIYRGYIDFIVEKTKALYSKCPSLKELFGT 1860

Query: 170  LPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVVS 3
            LPS+FHIE++LMAFHLSSEGEKA +A+LI+S+L+ +   A   NST L+CWA++VS
Sbjct: 1861 LPSVFHIEILLMAFHLSSEGEKATLANLIFSSLRTIDAPADGFNSTQLSCWAILVS 1916


>emb|CAN75802.1| hypothetical protein VITISV_016976 [Vitis vinifera]
          Length = 5622

 Score =  273 bits (698), Expect = 3e-71
 Identities = 139/236 (58%), Positives = 171/236 (72%), Gaps = 1/236 (0%)
 Frame = -2

Query: 707  AAALVSNSSNQ-NMPIQAAIELLNFLKTCIFSTEWHPSLYVDACNKXXXXXXXXXXXXLN 531
            A A V+ +SN  NMPIQAA E+L FLK C FS EWH S+Y D C K            LN
Sbjct: 1335 APASVNPTSNYCNMPIQAASEVLGFLKDCAFSPEWHTSVYEDGCKKLSGKHIDILLSILN 1394

Query: 530  CHGCCSEDYMSDSCIPSHEDGKIGHIHELCFDLLQNLLTNHALNDSLEDYLVEKILTVEN 351
            C GC SED +SD+     E  K GH+HELCF+LL NLLT HAL+DSLE+YL  +IL V++
Sbjct: 1395 CQGCYSEDRISDNLTGLQEQRKTGHVHELCFELLHNLLTRHALSDSLEEYLFGQILNVDS 1454

Query: 350  GAFSYNDRTLTLLAHTLFTRVGSAGSQLRTKICRGYVAFVVEKAKTVCVKCPSINDLVGT 171
            G F YND TLTLLAH+L  RVG AGSQLR+KI RGY+ F+VEK K +  KCPS+ +L GT
Sbjct: 1455 GCFIYNDLTLTLLAHSLICRVGLAGSQLRSKIYRGYIDFIVEKTKALYSKCPSLKELFGT 1514

Query: 170  LPSLFHIEVVLMAFHLSSEGEKAVMASLIYSTLKEVANLALDLNSTLLTCWALVVS 3
            LPS+FHIE++LMAFHLSSEGEKA +A+LI+S+L+ +   A   NST L+CWA++VS
Sbjct: 1515 LPSVFHIEILLMAFHLSSEGEKATLANLIFSSLRTIDAPADGFNSTQLSCWAILVS 1570


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