BLASTX nr result

ID: Glycyrrhiza23_contig00025923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025923
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001239616.1| uncharacterized protein LOC100804096 [Glycin...    74   1e-11
ref|XP_003609384.1| Auxin-responsive protein IAA20 [Medicago tru...    65   8e-09
ref|XP_003542633.1| PREDICTED: auxin-responsive protein IAA12-li...    58   7e-07

>ref|NP_001239616.1| uncharacterized protein LOC100804096 [Glycine max]
           gi|255640789|gb|ACU20678.1| unknown [Glycine max]
          Length = 199

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
 Frame = +2

Query: 5   NKKRSFSQLIMEHDHAPAESSNRD-AMLPTLSLLPPNRDHDDDEEHRSPYSTIITKSDEE 181
           +KKR+FSQL+M    AP ES+  D  MLPTLSLLP   +H  D++H S  S  ITK DEE
Sbjct: 16  HKKRTFSQLLMMDHAAPPESTLTDHVMLPTLSLLPLTPNHHHDDDHHSQCSN-ITKDDEE 74

Query: 182 EDGEALAGWPPVNY 223
           E  E++ GWPPVNY
Sbjct: 75  E--ESVVGWPPVNY 86


>ref|XP_003609384.1| Auxin-responsive protein IAA20 [Medicago truncatula]
           gi|355510439|gb|AES91581.1| Auxin-responsive protein
           IAA20 [Medicago truncatula]
          Length = 537

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 40/76 (52%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
 Frame = +2

Query: 5   NKKRSFSQLIMEHDHAPAESSNRDAMLPTLSLLP----PNRDHDDDEEHRSPYSTIITKS 172
           NKKR FSQL+   +HA AE++N    LPTLSLLP     + DHD D++H S  ST     
Sbjct: 33  NKKRRFSQLL---EHA-AETTN----LPTLSLLPLTPGHSDDHDHDDQHCSHSSTTTITK 84

Query: 173 DEEEDGEALAGWPPVN 220
             E+D EAL GWPPVN
Sbjct: 85  SNEDDEEALVGWPPVN 100


>ref|XP_003542633.1| PREDICTED: auxin-responsive protein IAA12-like [Glycine max]
          Length = 206

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/73 (49%), Positives = 45/73 (61%)
 Frame = +2

Query: 5   NKKRSFSQLIMEHDHAPAESSNRDAMLPTLSLLPPNRDHDDDEEHRSPYSTIITKSDEEE 184
           +KKR+FSQL+M  +HAP        MLPTLSLLP    H   ++H S  S I    DEEE
Sbjct: 22  HKKRTFSQLMMM-EHAPPP---HHVMLPTLSLLPLTPSHHVVDDHHSQCSNI--TKDEEE 75

Query: 185 DGEALAGWPPVNY 223
           +G  + GWPPVN+
Sbjct: 76  EG--VVGWPPVNH 86


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