BLASTX nr result

ID: Glycyrrhiza23_contig00025908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025908
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA...   202   3e-50
ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-l...   193   2e-47
emb|CBI27238.3| unnamed protein product [Vitis vinifera]              193   2e-47
ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-l...   188   5e-46
ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus...   186   2e-45

>ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
            domain-containing protein 1-like [Glycine max]
          Length = 847

 Score =  202 bits (515), Expect = 3e-50
 Identities = 105/121 (86%), Positives = 111/121 (91%), Gaps = 1/121 (0%)
 Frame = -2

Query: 599  NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLY 420
            NVAFEATEKDLR+LFSPFGQIKSLRLPMKFG+HRGFAFVEYVTQQEAQNAL ALSSTHLY
Sbjct: 727  NVAFEATEKDLRRLFSPFGQIKSLRLPMKFGNHRGFAFVEYVTQQEAQNALKALSSTHLY 786

Query: 419  GRHLVIERAKEGESLDELRARTAAQFS-EQNESQNATKLSKKRKQISFLDEGKMKFERLD 243
            GRHLVIERAKE ESL+ELRARTAAQFS EQN  Q+A K SKKRKQ+ FLDEGKMKF R+ 
Sbjct: 787  GRHLVIERAKEAESLEELRARTAAQFSDEQNGFQSAMKFSKKRKQVDFLDEGKMKFGRMA 846

Query: 242  D 240
            D
Sbjct: 847  D 847


>ref|XP_002275485.2| PREDICTED: probable RNA-binding protein 19-like [Vitis vinifera]
          Length = 983

 Score =  193 bits (491), Expect = 2e-47
 Identities = 99/120 (82%), Positives = 110/120 (91%)
 Frame = -2

Query: 599  NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLY 420
            NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVE+VT+QEAQNAL ALSSTHLY
Sbjct: 868  NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFVTKQEAQNALQALSSTHLY 927

Query: 419  GRHLVIERAKEGESLDELRARTAAQFSEQNESQNATKLSKKRKQISFLDEGKMKFERLDD 240
            GRHLV+ERAKEGESL+ELRARTAAQF++    QN TKLS+KRK ++ LDEG +KFER+ D
Sbjct: 928  GRHLVMERAKEGESLEELRARTAAQFTD----QNPTKLSRKRKHMAALDEGTVKFERIAD 983


>emb|CBI27238.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  193 bits (491), Expect = 2e-47
 Identities = 99/120 (82%), Positives = 110/120 (91%)
 Frame = -2

Query: 599 NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLY 420
           NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVE+VT+QEAQNAL ALSSTHLY
Sbjct: 652 NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEFVTKQEAQNALQALSSTHLY 711

Query: 419 GRHLVIERAKEGESLDELRARTAAQFSEQNESQNATKLSKKRKQISFLDEGKMKFERLDD 240
           GRHLV+ERAKEGESL+ELRARTAAQF++    QN TKLS+KRK ++ LDEG +KFER+ D
Sbjct: 712 GRHLVMERAKEGESLEELRARTAAQFTD----QNPTKLSRKRKHMAALDEGTVKFERIAD 767


>ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
          Length = 824

 Score =  188 bits (478), Expect = 5e-46
 Identities = 97/121 (80%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
 Frame = -2

Query: 599  NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLY 420
            NVAFEATEKDLR+LFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEA+NA  AL+STHLY
Sbjct: 704  NVAFEATEKDLRRLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAKNAREALASTHLY 763

Query: 419  GRHLVIERAKEGESLDELRARTAAQFS-EQNESQNATKLSKKRKQISFLDEGKMKFERLD 243
            GRHL+IE AKE E+L+ELRA+TAAQFS EQN  Q+A KLSKKR Q+  LDEG MKF R+ 
Sbjct: 764  GRHLLIEHAKEDETLEELRAKTAAQFSDEQNGFQSAMKLSKKRNQVDILDEGNMKFGRMA 823

Query: 242  D 240
            D
Sbjct: 824  D 824


>ref|XP_002532080.1| RNA binding motif protein, putative [Ricinus communis]
           gi|223528250|gb|EEF30303.1| RNA binding motif protein,
           putative [Ricinus communis]
          Length = 181

 Score =  186 bits (473), Expect = 2e-45
 Identities = 94/119 (78%), Positives = 107/119 (89%), Gaps = 1/119 (0%)
 Frame = -2

Query: 599 NVAFEATEKDLRQLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAQNALTALSSTHLY 420
           NVAFEATEKDLRQLFSPFGQIK LRLP+KFG+HRGFAFVEYVT+QEAQNAL ALSSTHLY
Sbjct: 61  NVAFEATEKDLRQLFSPFGQIKRLRLPVKFGNHRGFAFVEYVTKQEAQNALQALSSTHLY 120

Query: 419 GRHLVIERAKEGESLDELRARTAAQFSEQ-NESQNATKLSKKRKQISFLDEGKMKFERL 246
           GRHLV+ERAKEGESL+ELRARTAA FS++ +   N  K+SKKRK ++ LDEG MKF+R+
Sbjct: 121 GRHLVLERAKEGESLEELRARTAAHFSDELSGMHNPAKVSKKRKNMAVLDEGTMKFQRI 179


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