BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025880
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594404.1| Pentatricopeptide repeat-containing protein ...   174   9e-42
ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_003554903.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002521555.1| pentatricopeptide repeat-containing protein,...   103   2e-20

>ref|XP_003594404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355483452|gb|AES64655.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 516

 Score =  174 bits (440), Expect = 9e-42
 Identities = 87/115 (75%), Positives = 98/115 (85%)
 Frame = -1

Query: 350 DQHQLLHLTISQLNSLLTSYIRRGDPLSAWNLFRRLRRVRSSDIDAYTFTRLLRPSPLPL 171
           D HQLLH  IS+LNSL+TSYIRRG P+SA+NLF  LRR+R  D+D++TFT LLRPSP  L
Sbjct: 18  DHHQLLHRPISELNSLITSYIRRGHPISAFNLFLSLRRIRI-DLDSHTFTPLLRPSPTSL 76

Query: 170 GKQLHAQMTTTGSDSGTIAKTALLDMYSRHGSLDESLKVFDEMRHRDVVAWNALL 6
           GKQLH+QM  TGSDSGT+ KTALLDMYSRHGSL+ SLKVFDEM HRDVVAWN LL
Sbjct: 77  GKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLL 131


>ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Glycine max]
          Length = 547

 Score =  145 bits (366), Expect = 3e-33
 Identities = 81/128 (63%), Positives = 92/128 (71%), Gaps = 11/128 (8%)
 Frame = -1

Query: 356 SFDQHQLLHL----TISQLNSLLTSYIRRGDPLSAWNLFRRLRRVRSSDI--DAYTFTRL 195
           SF    L H+     ISQ NSL+ SY+RRGDP+SA  LF  LRR   SD+  DAYTFT +
Sbjct: 33  SFTNSSLSHVHFPSDISQTNSLIASYVRRGDPVSALTLFHSLRRRAHSDVVADAYTFTSI 92

Query: 194 LRPSPL-----PLGKQLHAQMTTTGSDSGTIAKTALLDMYSRHGSLDESLKVFDEMRHRD 30
           LR S L       G Q+HAQM  TG+DSGT+AKTALLDMYS+ GSLDE+ KVFDEMRHRD
Sbjct: 93  LRASSLLRVSGQFGTQVHAQMLKTGADSGTVAKTALLDMYSKCGSLDEATKVFDEMRHRD 152

Query: 29  VVAWNALL 6
           VVAWNALL
Sbjct: 153 VVAWNALL 160


>ref|XP_003554903.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
           mitochondrial-like [Glycine max]
          Length = 530

 Score =  145 bits (365), Expect = 4e-33
 Identities = 78/115 (67%), Positives = 88/115 (76%), Gaps = 7/115 (6%)
 Frame = -1

Query: 329 LTISQLNSLLTSYIRRGDPLSAWNLFRRLRRVRSSDI--DAYTFTRLLRPSPL-----PL 171
           L ISQ NSL+ SY+RRGDP+SA  LF  LRR   SD+  DAYTFT +LR S L       
Sbjct: 29  LYISQTNSLIASYVRRGDPVSALTLFHSLRRRAHSDVVADAYTFTSILRASSLLRVSGQF 88

Query: 170 GKQLHAQMTTTGSDSGTIAKTALLDMYSRHGSLDESLKVFDEMRHRDVVAWNALL 6
           G Q+HAQM  TG+DSGT+AKTALLDMYS+ GSLDE+ KVFDEMRHRDVVAWNALL
Sbjct: 89  GTQVHAQMLKTGADSGTVAKTALLDMYSKCGSLDEATKVFDEMRHRDVVAWNALL 143


>ref|XP_002310252.1| predicted protein [Populus trichocarpa] gi|222853155|gb|EEE90702.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  112 bits (280), Expect = 3e-23
 Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 4/116 (3%)
 Frame = -1

Query: 341 QLLHLTISQLNSLLTSYIRRGDPLSAWNLFRRLRRVRSSDIDAYTFTRLLRP-SPLP--- 174
           +L H  +  LNS L SY R G+ L+ W+LF R+      D+DAYTFT +LR  S LP   
Sbjct: 51  ELPHRDLYSLNSQLASYSRDGNFLATWDLFSRIHSA-FLDLDAYTFTPVLRACSALPDTK 109

Query: 173 LGKQLHAQMTTTGSDSGTIAKTALLDMYSRHGSLDESLKVFDEMRHRDVVAWNALL 6
            G+Q+HA M  TG+D GTI KTA++DMYS++G L ES+KVF+EM  RDVV WNAL+
Sbjct: 110 CGRQVHALMIKTGTDLGTITKTAVMDMYSKYGCLGESVKVFEEMEFRDVVTWNALV 165


>ref|XP_002521555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539233|gb|EEF40826.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 418

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 4/113 (3%)
 Frame = -1

Query: 332 HLTISQLNSLLTSYIRRGDPLSAWNLFRRLRRVRSSDIDAYTFTRLLRP-SPLP---LGK 165
           H ++  LNS L S+ R GD L+ W LF R+      D+DAYTFT +L   S LP    GK
Sbjct: 40  HRSLYSLNSQLASFSRLGDFLATWALFYRMH-CACLDLDAYTFTPVLSACSALPGAERGK 98

Query: 164 QLHAQMTTTGSDSGTIAKTALLDMYSRHGSLDESLKVFDEMRHRDVVAWNALL 6
           Q+HA M   G+D G IAKTAL+DMYS++G L +S+K F+E+  RDVV WN+LL
Sbjct: 99  QVHALMIKAGTDLGPIAKTALIDMYSKYGYLGDSVKAFEEVEFRDVVTWNSLL 151