BLASTX nr result

ID: Glycyrrhiza23_contig00025879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025879
         (690 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38333.1| unknown [Lotus japonicus]                              152   8e-35
ref|NP_001237200.1| cyclin-dependent kinase inhibitor 1;1 [Glyci...   148   1e-33
ref|NP_001238139.1| cyclin-dependent kinase inhibitor 1;2 [Glyci...   142   6e-32
ref|XP_003524631.1| PREDICTED: cyclin-dependent kinase inhibitor...   140   2e-31
gb|ACU19223.1| unknown [Glycine max]                                  140   2e-31

>gb|AFK38333.1| unknown [Lotus japonicus]
          Length = 193

 Score =  152 bits (383), Expect = 8e-35
 Identities = 98/194 (50%), Positives = 114/194 (58%), Gaps = 1/194 (0%)
 Frame = +1

Query: 28  TSTTSPKKRKAVINNTNQDQDQFMFSPSSFVQLMARXXXXXXXXGAPAPEEERCSTPTSD 207
           ++ TS K+ K  I  T   ++   FSPSS VQL +         GAP P E+  S  TSD
Sbjct: 21  SAETSSKRSKIAITTTTSREELLRFSPSSSVQLESTTSTSDG--GAPPPPEQCFSGATSD 78

Query: 208 DSPASCCSSNGYSFDLHEKRITKFSDPEVESAQVEETTTCDCGDQIIRREVIM-SLSSEL 384
           + P  CCSSN       EK ITKFSDPEVESA+ E T +CD  D+          +S+  
Sbjct: 79  ELP--CCSSN-------EKTITKFSDPEVESARAE-TASCDGRDEEEEETTRKREMSTSH 128

Query: 385 RTNSQEVXXXXXXXXXXXXSRCILSTTPQKMPTDSELEEFFSAAEKDIQKRFSYKYNYDI 564
            T+SQEV                     QKMPT+SELEEFFSAAEKDIQKRFS+KYNYDI
Sbjct: 129 GTSSQEVDSVEEKEKL------------QKMPTESELEEFFSAAEKDIQKRFSHKYNYDI 176

Query: 565 VKDVPLEGRYEWVQ 606
           VKDVPLEGRYEWVQ
Sbjct: 177 VKDVPLEGRYEWVQ 190


>ref|NP_001237200.1| cyclin-dependent kinase inhibitor 1;1 [Glycine max]
           gi|42362358|gb|AAS13374.1| cyclin-dependent kinase
           inhibitor 1;1 [Glycine max]
          Length = 205

 Score =  148 bits (373), Expect = 1e-33
 Identities = 97/195 (49%), Positives = 120/195 (61%), Gaps = 2/195 (1%)
 Frame = +1

Query: 28  TSTTSPKKRKAVINNTNQDQDQFMFSPSSFVQLMARXXXXXXXXGAPAPE--EERCSTPT 201
           +S     KRK + N+TNQ+  +   +P +      +           +PE  ++RC +PT
Sbjct: 21  SSAEPSSKRKKISNSTNQEP-KLSKTPRTSSSSAVKPATVTEMVRPVSPEMVQQRCLSPT 79

Query: 202 SDDSPASCCSSNGYSFDLHEKRITKFSDPEVESAQVEETTTCDCGDQIIRREVIMSLSSE 381
           S + PASCCSSNG S  L + RI K  D EVESAQVE T+TC+ G +I RRE  M  SSE
Sbjct: 80  SSEIPASCCSSNG-SIGLDQDRI-KLLDLEVESAQVE-TSTCNGGHEIERRE--MKRSSE 134

Query: 382 LRTNSQEVXXXXXXXXXXXXSRCILSTTPQKMPTDSELEEFFSAAEKDIQKRFSYKYNYD 561
           LR NSQE             S  +LS   + MPT+ ELEEFF+A+EKDIQKRF  +YNYD
Sbjct: 135 LRENSQE------PEPMEINSHRVLSKA-KAMPTELELEEFFAASEKDIQKRFQDRYNYD 187

Query: 562 IVKDVPLEGRYEWVQ 606
           IVKDVPLEGRYEWVQ
Sbjct: 188 IVKDVPLEGRYEWVQ 202


>ref|NP_001238139.1| cyclin-dependent kinase inhibitor 1;2 [Glycine max]
           gi|46844158|gb|AAS13375.1| cyclin-dependent kinase
           inhibitor 1;2 [Glycine max]
          Length = 198

 Score =  142 bits (358), Expect = 6e-32
 Identities = 89/143 (62%), Positives = 97/143 (67%)
 Frame = +1

Query: 178 EERCSTPTSDDSPASCCSSNGYSFDLHEKRITKFSDPEVESAQVEETTTCDCGDQIIRRE 357
           +ERC +PTS + PASCCSSNG S  L E RI K  D EVESAQVE T+TC+ G +I RRE
Sbjct: 65  QERCLSPTSSEIPASCCSSNG-SIGLDEDRI-KLLDLEVESAQVE-TSTCNGGQEIERRE 121

Query: 358 VIMSLSSELRTNSQEVXXXXXXXXXXXXSRCILSTTPQKMPTDSELEEFFSAAEKDIQKR 537
             M  SSELR NSQE             S   LS   + MPT+ E EEFF AAEKDIQKR
Sbjct: 122 --MKSSSELRENSQE------PEPMEINSHRALSKA-KAMPTELEXEEFFVAAEKDIQKR 172

Query: 538 FSYKYNYDIVKDVPLEGRYEWVQ 606
           F  KYNYDIVKDVPLEGRYEWVQ
Sbjct: 173 FQDKYNYDIVKDVPLEGRYEWVQ 195


>ref|XP_003524631.1| PREDICTED: cyclin-dependent kinase inhibitor 4 [Glycine max]
          Length = 184

 Score =  140 bits (353), Expect = 2e-31
 Identities = 100/197 (50%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
 Frame = +1

Query: 31  STTSPKKRKAVINNTNQDQDQFMFSPSSFVQLMARXXXXXXXXGAPAPEEERCSTPTSDD 210
           S +S K+RK  INN             +FVQ+ +           PA  E       S +
Sbjct: 19  SASSRKRRKISINN-------------NFVQIKSLSNAT-----VPATGER-----ISGE 55

Query: 211 SPASCCSSNGYSFDLHEKRITKFSDPEVESAQVEETTTCDCGDQI--IRREVIMSLSSEL 384
           SPASCCSSNG   D  E RI KFSD EVES +V  T+TCDCG+Q   IRRE  MSL+SEL
Sbjct: 56  SPASCCSSNGSVDD--ENRIIKFSDLEVESTRVV-TSTCDCGEQQQQIRRE--MSLTSEL 110

Query: 385 R---TNSQEVXXXXXXXXXXXXSRCILSTTPQKMPTDSELEEFFSAAEKDIQKRFSYKYN 555
           R   ++SQEV                 S  PQKMPT+ EL+EFF+AAEKDI+KRFS KYN
Sbjct: 111 RITNSSSQEVDSAEEQITQTK------SLPPQKMPTELELDEFFAAAEKDIRKRFSDKYN 164

Query: 556 YDIVKDVPLEGRYEWVQ 606
           YDIVKDV LEGRYEWV+
Sbjct: 165 YDIVKDVSLEGRYEWVK 181


>gb|ACU19223.1| unknown [Glycine max]
          Length = 184

 Score =  140 bits (353), Expect = 2e-31
 Identities = 100/197 (50%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
 Frame = +1

Query: 31  STTSPKKRKAVINNTNQDQDQFMFSPSSFVQLMARXXXXXXXXGAPAPEEERCSTPTSDD 210
           S +S K+RK  INN             +FVQ+ +           PA  E       S +
Sbjct: 19  SASSRKRRKISINN-------------NFVQIKSLSNAT-----VPATGER-----ISGE 55

Query: 211 SPASCCSSNGYSFDLHEKRITKFSDPEVESAQVEETTTCDCGDQI--IRREVIMSLSSEL 384
           SPASCCSSNG   D  E RI KFSD EVES +V  T+TCDCG+Q   IRRE  MSL+SEL
Sbjct: 56  SPASCCSSNGSVDD--ENRIIKFSDLEVESTRVV-TSTCDCGEQQQQIRRE--MSLTSEL 110

Query: 385 R---TNSQEVXXXXXXXXXXXXSRCILSTTPQKMPTDSELEEFFSAAEKDIQKRFSYKYN 555
           R   ++SQEV                 S  PQKMPT+ EL+EFF+AAEKDI+KRFS KYN
Sbjct: 111 RITNSSSQEVDSAEEQITQTK------SLPPQKMPTELELDEFFAAAEKDIRKRFSDKYN 164

Query: 556 YDIVKDVPLEGRYEWVQ 606
           YDIVKDV LEGRYEWV+
Sbjct: 165 YDIVKDVSLEGRYEWVK 181


Top