BLASTX nr result

ID: Glycyrrhiza23_contig00025842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025842
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533062.1| PREDICTED: WD repeat-containing protein 43-l...   232   3e-59
ref|XP_003529814.1| PREDICTED: WD repeat-containing protein 43-l...   217   9e-55
emb|CAN62455.1| hypothetical protein VITISV_028174 [Vitis vinifera]   156   2e-36
ref|XP_003632804.1| PREDICTED: uncharacterized WD repeat-contain...   155   3e-36
emb|CBI36264.3| unnamed protein product [Vitis vinifera]              155   3e-36

>ref|XP_003533062.1| PREDICTED: WD repeat-containing protein 43-like [Glycine max]
          Length = 620

 Score =  232 bits (591), Expect = 3e-59
 Identities = 112/133 (84%), Positives = 120/133 (90%)
 Frame = -1

Query: 401 MVKDKLKEPVLTAFTPNGDYVAILSANGTAKIWNTNSGCLLAEWKPSDGDDDIRYSCTAC 222
           MVKDKLK+ VLTAFTPNGDYVAILSAN  AKIWNTN+G LLAEWKPSDGD DIRYSC AC
Sbjct: 1   MVKDKLKKHVLTAFTPNGDYVAILSANEVAKIWNTNTGHLLAEWKPSDGDHDIRYSCIAC 60

Query: 221 SFTGKKRRKGQGTCLFALSTVDGSVLAVDVSTGERKWTTSHPGGVHGLSFANKGKLLRVV 42
           SF GKKRRK QGTCL AL T+DGSVLAVDVSTGERK TTSHPGG+ GLSFANKG+LLR+V
Sbjct: 61  SFIGKKRRKEQGTCLLALGTIDGSVLAVDVSTGERKLTTSHPGGICGLSFANKGRLLRIV 120

Query: 41  GHNGMAYEINTET 3
           GHNG+AY +NTET
Sbjct: 121 GHNGVAYGVNTET 133


>ref|XP_003529814.1| PREDICTED: WD repeat-containing protein 43-like [Glycine max]
          Length = 622

 Score =  217 bits (552), Expect = 9e-55
 Identities = 106/133 (79%), Positives = 116/133 (87%)
 Frame = -1

Query: 401 MVKDKLKEPVLTAFTPNGDYVAILSANGTAKIWNTNSGCLLAEWKPSDGDDDIRYSCTAC 222
           MVKDKLK+ VLTAFTPN D VAILSAN  AKIWNTN+G LLAEWKPS GD DI YSC AC
Sbjct: 1   MVKDKLKKHVLTAFTPNEDSVAILSANEVAKIWNTNTGHLLAEWKPSKGDHDIHYSCIAC 60

Query: 221 SFTGKKRRKGQGTCLFALSTVDGSVLAVDVSTGERKWTTSHPGGVHGLSFANKGKLLRVV 42
           SF G+K RK QGT L ALST+DGSV+AVDVSTGERK TTSHPGG+ GLSFANKG+LLR+V
Sbjct: 61  SFIGEKHRKEQGTSLLALSTIDGSVIAVDVSTGERKLTTSHPGGICGLSFANKGRLLRIV 120

Query: 41  GHNGMAYEINTET 3
           GHNG+AYE+NTET
Sbjct: 121 GHNGVAYEVNTET 133


>emb|CAN62455.1| hypothetical protein VITISV_028174 [Vitis vinifera]
          Length = 282

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/135 (56%), Positives = 97/135 (71%), Gaps = 3/135 (2%)
 Frame = -1

Query: 401 MVKDKLKEPVLTAFTPNGDYVAILSANGTAKIWNTNSGCLLAEWKPSDGDDDIRYSCTAC 222
           M ++K  +P++++FTP+GD++AILS +GT KIWNT+   L+AEWK  D D  I YSC  C
Sbjct: 1   MAREKKLKPIVSSFTPDGDFLAILSPDGTLKIWNTSYQSLVAEWKGPDVDSSISYSCMTC 60

Query: 221 SFTGKKRRKGQGTC-LFALSTVDGSVLAVDVSTGERKWTTS--HPGGVHGLSFANKGKLL 51
           SF GKKRRK  G C L AL T DGS+L VD+  GE KW +S  HPGG+ GLSFANKG++L
Sbjct: 61  SFVGKKRRKEHGACLLLALVTNDGSILVVDIFAGEMKWESSRYHPGGIVGLSFANKGRIL 120

Query: 50  RVVGHNGMAYEINTE 6
            VVG NGM   + +E
Sbjct: 121 HVVGTNGMVSTLKSE 135


>ref|XP_003632804.1| PREDICTED: uncharacterized WD repeat-containing protein
           all2124-like [Vitis vinifera]
          Length = 234

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/135 (56%), Positives = 98/135 (72%), Gaps = 3/135 (2%)
 Frame = -1

Query: 401 MVKDKLKEPVLTAFTPNGDYVAILSANGTAKIWNTNSGCLLAEWKPSDGDDDIRYSCTAC 222
           M ++K  +PV+++FTP+GD++AILS +GT KIWNT+   L+AEWK  D D  I YSC  C
Sbjct: 1   MAREKKLKPVVSSFTPDGDFLAILSPDGTVKIWNTSYQSLVAEWKGPDVDSGIGYSCMTC 60

Query: 221 SFTGKKRRKGQGTC-LFALSTVDGSVLAVDVSTGERKWTTS--HPGGVHGLSFANKGKLL 51
           SF GKKRRK +G C L AL T DG++L VD+  GE KW +S  HPGG+ GLSFANKG++L
Sbjct: 61  SFVGKKRRKERGACLLLALVTNDGNILVVDIFAGEMKWESSRYHPGGIVGLSFANKGRIL 120

Query: 50  RVVGHNGMAYEINTE 6
            VVG NGM   + +E
Sbjct: 121 HVVGTNGMVSTLKSE 135


>emb|CBI36264.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/135 (56%), Positives = 98/135 (72%), Gaps = 3/135 (2%)
 Frame = -1

Query: 401 MVKDKLKEPVLTAFTPNGDYVAILSANGTAKIWNTNSGCLLAEWKPSDGDDDIRYSCTAC 222
           M ++K  +PV+++FTP+GD++AILS +GT KIWNT+   L+AEWK  D D  I YSC  C
Sbjct: 1   MAREKKLKPVVSSFTPDGDFLAILSPDGTVKIWNTSYQSLVAEWKGPDVDSGIGYSCMTC 60

Query: 221 SFTGKKRRKGQGTC-LFALSTVDGSVLAVDVSTGERKWTTS--HPGGVHGLSFANKGKLL 51
           SF GKKRRK +G C L AL T DG++L VD+  GE KW +S  HPGG+ GLSFANKG++L
Sbjct: 61  SFVGKKRRKERGACLLLALVTNDGNILVVDIFAGEMKWESSRYHPGGIVGLSFANKGRIL 120

Query: 50  RVVGHNGMAYEINTE 6
            VVG NGM   + +E
Sbjct: 121 HVVGTNGMVSTLKSE 135


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