BLASTX nr result

ID: Glycyrrhiza23_contig00025832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025832
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    90   5e-27
ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding sub...    88   1e-24
ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding sub...    88   1e-24
ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding sub...    67   9e-19
ref|XP_003602586.1| hypothetical protein MTR_3g095950 [Medicago ...    67   2e-16

>ref|XP_003599985.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355489033|gb|AES70236.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 537

 Score = 89.7 bits (221), Expect(2) = 5e-27
 Identities = 42/87 (48%), Positives = 60/87 (68%)
 Frame = -2

Query: 263 GQRILASVKRTLVYKFVNQLKEGNVYSFKYLTVAANVEQFKTCHHAFKLVFQFSSKVQLM 84
           G RI AS+K+TL+YKF ++++EG VYSF+ + +AAN   +KT HH +KL FQF +K   +
Sbjct: 51  GSRIHASIKKTLLYKFQSEIREGKVYSFENMGIAANGGSYKTTHHPYKLNFQFGTKCLSL 110

Query: 83  DNGRVIGDGYQFVPISQITGPNFDQDY 3
               V G  ++FVPIS I G ++D DY
Sbjct: 111 CGALVSGSDFKFVPISDIVGGSYDCDY 137



 Score = 56.2 bits (134), Expect(2) = 5e-27
 Identities = 23/43 (53%), Positives = 33/43 (76%)
 Frame = -3

Query: 388 ASLEESKESWLILAKVIRLWVVSDINKNKIPFSVEMVLMNEQG 260
           + +  SK +W I A+V+RLW VSD N+N +PFS+EMVLM+ +G
Sbjct: 9   SQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEG 51


>ref|XP_003600272.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489320|gb|AES70523.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 701

 Score = 88.2 bits (217), Expect(2) = 1e-24
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = -2

Query: 263 GQRILASVKRTLVYKFVNQLKEGNVYSFKYLTVAANVEQFKTCHHAFKLVFQFSSKVQLM 84
           G RI AS+K+TL YKF ++++EG VYSF+ + VAAN   +KT HH +KL FQF +K   +
Sbjct: 51  GSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPL 110

Query: 83  DNGRVIGDGYQFVPISQITGPNFDQDY 3
               V G  ++FVPIS I G ++D DY
Sbjct: 111 FGALVSGSDFKFVPISDIVGGSYDCDY 137



 Score = 50.1 bits (118), Expect(2) = 1e-24
 Identities = 21/43 (48%), Positives = 32/43 (74%)
 Frame = -3

Query: 388 ASLEESKESWLILAKVIRLWVVSDINKNKIPFSVEMVLMNEQG 260
           + +  SK +  I A+V+RLW +SD N+N +PFS+EMVLM+ +G
Sbjct: 9   SQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEG 51



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/87 (41%), Positives = 53/87 (60%)
 Frame = -2

Query: 263 GQRILASVKRTLVYKFVNQLKEGNVYSFKYLTVAANVEQFKTCHHAFKLVFQFSSKVQLM 84
           G +I AS+K+TL YKF ++++EG VYSF+ + VAAN   +KT HH +KL  QF +K   +
Sbjct: 210 GSKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNVQFGTKCLPL 269

Query: 83  DNGRVIGDGYQFVPISQITGPNFDQDY 3
             G    D Y    I  +TG   +++Y
Sbjct: 270 CGGSYDCD-YLVDVIGMLTGVGTEREY 295


>ref|XP_003600269.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355489317|gb|AES70520.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 323

 Score = 88.2 bits (217), Expect(2) = 1e-24
 Identities = 43/87 (49%), Positives = 59/87 (67%)
 Frame = -2

Query: 263 GQRILASVKRTLVYKFVNQLKEGNVYSFKYLTVAANVEQFKTCHHAFKLVFQFSSKVQLM 84
           G RI AS+K+TL YKF ++++EG VYSF+ + VAAN   +KT HH +KL FQF +K   +
Sbjct: 51  GSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPL 110

Query: 83  DNGRVIGDGYQFVPISQITGPNFDQDY 3
               V G  ++FVPIS I G ++D DY
Sbjct: 111 CGALVSGSDFKFVPISDIVGGSYDCDY 137



 Score = 50.1 bits (118), Expect(2) = 1e-24
 Identities = 21/43 (48%), Positives = 32/43 (74%)
 Frame = -3

Query: 388 ASLEESKESWLILAKVIRLWVVSDINKNKIPFSVEMVLMNEQG 260
           + +  SK +  I A+V+RLW +SD N+N +PFS+EMVLM+ +G
Sbjct: 9   SQISSSKPAGNIKARVVRLWKLSDFNRNTLPFSIEMVLMDSEG 51


>ref|XP_003595510.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355484558|gb|AES65761.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 549

 Score = 67.4 bits (163), Expect(2) = 9e-19
 Identities = 33/87 (37%), Positives = 52/87 (59%)
 Frame = -2

Query: 263 GQRILASVKRTLVYKFVNQLKEGNVYSFKYLTVAANVEQFKTCHHAFKLVFQFSSKVQLM 84
           G RI ASV+RTL+YK+  +L+E  V+S    +VA+NV  ++T  H +K+ FQ+ +K++  
Sbjct: 51  GDRINASVRRTLIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQC 110

Query: 83  DNGRVIGDGYQFVPISQITGPNFDQDY 3
           D+  V  D Y      +I    +D DY
Sbjct: 111 DDKFVPADIYVIGDSREIFQSEYDTDY 137



 Score = 50.8 bits (120), Expect(2) = 9e-19
 Identities = 20/43 (46%), Positives = 33/43 (76%)
 Frame = -3

Query: 388 ASLEESKESWLILAKVIRLWVVSDINKNKIPFSVEMVLMNEQG 260
           + +  SKE+W I  +V+RLW V D+ K+++P+S+EMVLM+ +G
Sbjct: 9   SDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKG 51


>ref|XP_003602586.1| hypothetical protein MTR_3g095950 [Medicago truncatula]
           gi|355491634|gb|AES72837.1| hypothetical protein
           MTR_3g095950 [Medicago truncatula]
          Length = 203

 Score = 67.4 bits (163), Expect(2) = 2e-16
 Identities = 32/87 (36%), Positives = 52/87 (59%)
 Frame = -2

Query: 263 GQRILASVKRTLVYKFVNQLKEGNVYSFKYLTVAANVEQFKTCHHAFKLVFQFSSKVQLM 84
           G RI AS++RTL+YKF NQL+EG V++     VA+N+  ++   + +KL F  ++KV+L 
Sbjct: 51  GDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLS 110

Query: 83  DNGRVIGDGYQFVPISQITGPNFDQDY 3
               V  + Y F P   +   ++D +Y
Sbjct: 111 KTVLVPTNVYSFTPAPDVFNESYDNNY 137



 Score = 42.7 bits (99), Expect(2) = 2e-16
 Identities = 15/43 (34%), Positives = 29/43 (67%)
 Frame = -3

Query: 388 ASLEESKESWLILAKVIRLWVVSDINKNKIPFSVEMVLMNEQG 260
           +++   K+SW ++ +V+R W   D    K+PFS+E+VL++ +G
Sbjct: 9   SNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKG 51


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