BLASTX nr result

ID: Glycyrrhiza23_contig00025805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025805
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago t...   197   7e-49
ref|NP_001238217.1| DNA mismatch repair protein [Glycine max] gi...   194   8e-48
ref|XP_003555697.1| PREDICTED: uncharacterized protein LOC100798...   189   3e-46
gb|AAX31514.1| DNA mismatch repair protein [Phaseolus vulgaris]       188   3e-46
gb|ABA29739.1| DNA mismatch repair protein [Phaseolus vulgaris]       188   3e-46

>ref|XP_003590183.1| DNA mismatch repair protein mutS [Medicago truncatula]
            gi|355479231|gb|AES60434.1| DNA mismatch repair protein
            mutS [Medicago truncatula]
          Length = 1230

 Score =  197 bits (501), Expect = 7e-49
 Identities = 96/111 (86%), Positives = 101/111 (90%)
 Frame = +3

Query: 3    EGRRRKWIFPTVVESQGSEDVKLLDKNHGMKIVGLLPYWFNIAEGGAVRNTVDMKSLFLL 182
            EGRRRKW+FPT+VESQ  ED    DKN  MKIVGLLPYWFNIAEGGAV NTVDM+SLFLL
Sbjct: 800  EGRRRKWVFPTIVESQKLEDGMPSDKNRKMKIVGLLPYWFNIAEGGAVLNTVDMQSLFLL 859

Query: 183  TGPNGGGKSSILRSICAAALLGICGFMVPAESALIPYFDSIMLHMKSYDSP 335
            TGPNGGGKSS+LRSICAAALLGICG MVPAESA+IPYFDSIMLHMKSYDSP
Sbjct: 860  TGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSIMLHMKSYDSP 910


>ref|NP_001238217.1| DNA mismatch repair protein [Glycine max] gi|61696669|gb|AAX53095.1|
            DNA mismatch repair protein [Glycine max]
          Length = 1130

 Score =  194 bits (492), Expect = 8e-48
 Identities = 95/111 (85%), Positives = 100/111 (90%)
 Frame = +3

Query: 3    EGRRRKWIFPTVVESQGSEDVKLLDKNHGMKIVGLLPYWFNIAEGGAVRNTVDMKSLFLL 182
            EGRRR+W+FPT+VES G EDVK LDK HGMKI GLLPYWF+IAEG  VRN VDM+SLFLL
Sbjct: 708  EGRRRRWVFPTLVESHGFEDVKSLDKTHGMKISGLLPYWFHIAEG-VVRNDVDMQSLFLL 766

Query: 183  TGPNGGGKSSILRSICAAALLGICGFMVPAESALIPYFDSIMLHMKSYDSP 335
            TGPNGGGKSS LRSICAAALLGICG MVPAESALIPYFDSI LHMKSYDSP
Sbjct: 767  TGPNGGGKSSFLRSICAAALLGICGLMVPAESALIPYFDSITLHMKSYDSP 817


>ref|XP_003555697.1| PREDICTED: uncharacterized protein LOC100798513 [Glycine max]
          Length = 1134

 Score =  189 bits (479), Expect = 3e-46
 Identities = 92/111 (82%), Positives = 100/111 (90%)
 Frame = +3

Query: 3    EGRRRKWIFPTVVESQGSEDVKLLDKNHGMKIVGLLPYWFNIAEGGAVRNTVDMKSLFLL 182
            EGRRR+W+FPT+VES G EDVK L+K HGMKIVGLLPYW ++AEG  VRN VDM+SLFLL
Sbjct: 710  EGRRRRWVFPTLVESHGFEDVKSLNKIHGMKIVGLLPYWLHVAEG-VVRNDVDMQSLFLL 768

Query: 183  TGPNGGGKSSILRSICAAALLGICGFMVPAESALIPYFDSIMLHMKSYDSP 335
            TGPNGGGKSS+LRSICAAALLGICG MVPAESA IPYFDSIMLHM SYDSP
Sbjct: 769  TGPNGGGKSSLLRSICAAALLGICGLMVPAESAHIPYFDSIMLHMNSYDSP 819


>gb|AAX31514.1| DNA mismatch repair protein [Phaseolus vulgaris]
          Length = 1126

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/111 (82%), Positives = 99/111 (89%)
 Frame = +3

Query: 3    EGRRRKWIFPTVVESQGSEDVKLLDKNHGMKIVGLLPYWFNIAEGGAVRNTVDMKSLFLL 182
            EGRRR+W+FPT+ ES G EDVK  DK HGMKIVGL PYWF+IAEG  VRN VDM+SLFLL
Sbjct: 709  EGRRRRWVFPTLAESNGFEDVKSSDKIHGMKIVGLAPYWFHIAEG-IVRNDVDMQSLFLL 767

Query: 183  TGPNGGGKSSILRSICAAALLGICGFMVPAESALIPYFDSIMLHMKSYDSP 335
            TGPNGGGKSS+LRSICAAALLGICG MVPAESA+IPYFDSI LHMKSYDSP
Sbjct: 768  TGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSITLHMKSYDSP 818


>gb|ABA29739.1| DNA mismatch repair protein [Phaseolus vulgaris]
          Length = 1126

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/111 (82%), Positives = 99/111 (89%)
 Frame = +3

Query: 3    EGRRRKWIFPTVVESQGSEDVKLLDKNHGMKIVGLLPYWFNIAEGGAVRNTVDMKSLFLL 182
            EGRRR+W+FPT+ ES G EDVK  DK HGMKIVGL PYWF+IAEG  VRN VDM+SLFLL
Sbjct: 709  EGRRRRWVFPTLAESNGFEDVKSSDKIHGMKIVGLAPYWFHIAEG-IVRNDVDMQSLFLL 767

Query: 183  TGPNGGGKSSILRSICAAALLGICGFMVPAESALIPYFDSIMLHMKSYDSP 335
            TGPNGGGKSS+LRSICAAALLGICG MVPAESA+IPYFDSI LHMKSYDSP
Sbjct: 768  TGPNGGGKSSLLRSICAAALLGICGLMVPAESAVIPYFDSITLHMKSYDSP 818


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