BLASTX nr result

ID: Glycyrrhiza23_contig00025804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025804
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycin...   197   7e-49
ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycin...   191   5e-47
ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif...   138   5e-31
emb|CBI25610.3| unnamed protein product [Vitis vinifera]              138   5e-31
gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]             137   9e-31

>ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 1636

 Score =  197 bits (501), Expect = 7e-49
 Identities = 96/118 (81%), Positives = 105/118 (88%)
 Frame = -1

Query: 356 MPDGETSVAGAGQPPMEPTIGVSDHEHSLSLSQVKNHDDSARKDPKIIARKYQLELCKKA 177
           MPDGE+S    GQ  MEP++ +SD   SLSLSQVKNHDDS +KDP+ IAR+YQLELCKKA
Sbjct: 1   MPDGESSAVAGGQVSMEPSLSLSDQLQSLSLSQVKNHDDSVKKDPRKIARRYQLELCKKA 60

Query: 176 MEENIIVYLGTGCGKTHIAVLLMHEMGHLIRKPEKNICVFLAPTVALVHQQARVIADS 3
           MEENIIVYLGTGCGKTHIAVLLMHEMG LIRKP+KNICVFLAPTVALVHQQA+VIADS
Sbjct: 61  MEENIIVYLGTGCGKTHIAVLLMHEMGDLIRKPQKNICVFLAPTVALVHQQAKVIADS 118


>ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
          Length = 1636

 Score =  191 bits (485), Expect = 5e-47
 Identities = 97/119 (81%), Positives = 106/119 (89%), Gaps = 1/119 (0%)
 Frame = -1

Query: 356 MPDGETSVAGAG-QPPMEPTIGVSDHEHSLSLSQVKNHDDSARKDPKIIARKYQLELCKK 180
           MPDGE+SV  AG Q  MEP++ VS+   SLSLSQ KNHDDS +KDP+ IARKYQLELCKK
Sbjct: 1   MPDGESSVVVAGGQASMEPSLSVSNQLQSLSLSQDKNHDDSVKKDPRKIARKYQLELCKK 60

Query: 179 AMEENIIVYLGTGCGKTHIAVLLMHEMGHLIRKPEKNICVFLAPTVALVHQQARVIADS 3
           AMEENIIVYLGTGCGKTHIAVLLM+ MGHLIRKP+KNICVFLAPTVALVHQQA+VIADS
Sbjct: 61  AMEENIIVYLGTGCGKTHIAVLLMYGMGHLIRKPQKNICVFLAPTVALVHQQAKVIADS 119


>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
          Length = 1622

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/79 (82%), Positives = 74/79 (93%)
 Frame = -1

Query: 239 SARKDPKIIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMHEMGHLIRKPEKNICV 60
           S++KDP+ IAR YQLELCKKA+EENIIVY+GTGCGKTHIAVLL+H +GHLIRKP+KNICV
Sbjct: 38  SSKKDPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICV 97

Query: 59  FLAPTVALVHQQARVIADS 3
           FLAPTVALV QQARVI +S
Sbjct: 98  FLAPTVALVQQQARVIEES 116


>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
          Length = 1623

 Score =  138 bits (347), Expect = 5e-31
 Identities = 65/79 (82%), Positives = 74/79 (93%)
 Frame = -1

Query: 239 SARKDPKIIARKYQLELCKKAMEENIIVYLGTGCGKTHIAVLLMHEMGHLIRKPEKNICV 60
           S++KDP+ IAR YQLELCKKA+EENIIVY+GTGCGKTHIAVLL+H +GHLIRKP+KNICV
Sbjct: 38  SSKKDPRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICV 97

Query: 59  FLAPTVALVHQQARVIADS 3
           FLAPTVALV QQARVI +S
Sbjct: 98  FLAPTVALVQQQARVIEES 116


>gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
          Length = 1622

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/112 (62%), Positives = 87/112 (77%), Gaps = 3/112 (2%)
 Frame = -1

Query: 329 GAGQPPMEPTIGVSDHEHSLSLSQVKNHDDSARK---DPKIIARKYQLELCKKAMEENII 159
           G   PP   T  +++   +LSLS   +   S +K   DP+ IARKYQ++LCKKA+EEN++
Sbjct: 9   GTESPPSAATSPITEQLSALSLSGDIDSPVSVQKPEKDPRKIARKYQMDLCKKALEENVV 68

Query: 158 VYLGTGCGKTHIAVLLMHEMGHLIRKPEKNICVFLAPTVALVHQQARVIADS 3
           VYLGTGCGKTHIAVLL++EMG LIRKP+K+ICVFLAPTVALV QQA+VI DS
Sbjct: 69  VYLGTGCGKTHIAVLLIYEMGQLIRKPQKSICVFLAPTVALVQQQAKVIEDS 120


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