BLASTX nr result

ID: Glycyrrhiza23_contig00025777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025777
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   381   e-103
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   367   2e-99
ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809...   362   8e-98
ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249...   257   2e-66
ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   246   6e-63

>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  381 bits (979), Expect = e-103
 Identities = 200/289 (69%), Positives = 216/289 (74%)
 Frame = +3

Query: 3   DLVVLQRSRSLRDXXXXXXXXXXXXVVDLLFKRAENDAMAQDGRRSVGVDRRKEGRRLSG 182
           DLVVLQRSRSLRD            VVDLLFKR ENDA++Q GRRS+GV+RRKEGRRLSG
Sbjct: 52  DLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRVENDAVSQGGRRSIGVERRKEGRRLSG 111

Query: 183 TGTSPPLVSKSTSRVAPGEASRGDDGVPATSERSIRSGMGDGRRVGREESGRKSIRPDYL 362
           T  SPPLVS  +SRVAPGE  RG+DG+ A SERS RSGMGDGRRVGREESGRK+ RPD+L
Sbjct: 112 T--SPPLVSIGSSRVAPGEIVRGNDGITAPSERSSRSGMGDGRRVGREESGRKNDRPDFL 169

Query: 363 EFSQGQPLNEAGKSLAEDVIXXXXXXXXXXXXXXGKNVQDVHVKTLSEQLNDVPLDSDDL 542
           + +  +PLN+AGKSLAEDVI              GKNVQD  VKTLSEQLNDVPLDSDDL
Sbjct: 170 DVNPEEPLNQAGKSLAEDVISRHSESKARKSKQRGKNVQDAQVKTLSEQLNDVPLDSDDL 229

Query: 543 ASSNIHFRGRLPRQEKIIKEAEASMRGHGSGMNXXXXXXXXXXXXXXXXXXXXDIGAENE 722
           ASSNIHFRGR PRQEKIIKE EA MR HGSGMN                    DI AENE
Sbjct: 230 ASSNIHFRGRFPRQEKIIKEVEARMRSHGSGMNRGKRRKFRSARRTRVATTSRDIVAENE 289

Query: 723 LSVASNSIAQGSAHQKYHSEEVDDYADENVTRAPKNGCGIPWNWSRIHH 869
           LSVASNS+AQ S H KYH EE D++ADENVTRAPKNGCGIPWNWSRIHH
Sbjct: 290 LSVASNSLAQASVHHKYHLEEADEFADENVTRAPKNGCGIPWNWSRIHH 338


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355482867|gb|AES64070.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  367 bits (942), Expect = 2e-99
 Identities = 199/292 (68%), Positives = 218/292 (74%), Gaps = 3/292 (1%)
 Frame = +3

Query: 3   DLVVLQRSRSLRDXXXXXXXXXXXXVVDLLFKRAENDAMAQDGRRSVGVDRRKEGRRLSG 182
           DLVVLQRSRSLRD            VVDLLFKRA+ND  +Q GRRSVG D RKEG +LS 
Sbjct: 52  DLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRADNDGASQGGRRSVGNDSRKEGGKLSK 111

Query: 183 TGTSPPLVSKSTSRVAPGEASRGDDGVPA-TSERSIRSGMGDGRRVGREESGRKSIRPDY 359
            G SPPLVSK TSRVAPGE SRG+D VPA TSERS RSG+G+GRRVGREESGRKS RPDY
Sbjct: 112 IGNSPPLVSKGTSRVAPGEGSRGNDAVPAATSERSSRSGIGNGRRVGREESGRKSNRPDY 171

Query: 360 LEF-SQGQPLNEAGKSLAEDVIXXXXXXXXXXXXXXGKNVQDVHVKTLSEQLNDVPLDSD 536
           LE  SQ Q L+EAGKSLAEDV+              GKNVQDV  KTLSEQL+DVPLDSD
Sbjct: 172 LEVTSQEQLLHEAGKSLAEDVVSRHSQSIERKSRQRGKNVQDVQAKTLSEQLHDVPLDSD 231

Query: 537 DLASSNIHFRGRLPRQEKIIKEAE-ASMRGHGSGMNXXXXXXXXXXXXXXXXXXXXDIGA 713
           DLASSNIHFR R  RQEKII++A+ AS+R H +GMN                    DIGA
Sbjct: 232 DLASSNIHFRARFRRQEKIIEQAQQASVRSHANGMNRIKRRKFRSTRKARVATTSRDIGA 291

Query: 714 ENELSVASNSIAQGSAHQKYHSEEVDDYADENVTRAPKNGCGIPWNWSRIHH 869
           ENELSVASNS+ +GSAHQKYHSEEVD+YAD+NVTRAPKNGCG+PWNWSRIHH
Sbjct: 292 ENELSVASNSLPEGSAHQKYHSEEVDNYADDNVTRAPKNGCGMPWNWSRIHH 343


>ref|XP_003542971.1| PREDICTED: uncharacterized protein LOC100809005 [Glycine max]
          Length = 1101

 Score =  362 bits (928), Expect = 8e-98
 Identities = 190/289 (65%), Positives = 211/289 (73%)
 Frame = +3

Query: 3   DLVVLQRSRSLRDXXXXXXXXXXXXVVDLLFKRAENDAMAQDGRRSVGVDRRKEGRRLSG 182
           DLVVLQRSRSLRD            VVDLLFKR ENDA++Q GR SVG +RRKEGRRLSG
Sbjct: 52  DLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRVENDAVSQGGRMSVGAERRKEGRRLSG 111

Query: 183 TGTSPPLVSKSTSRVAPGEASRGDDGVPATSERSIRSGMGDGRRVGREESGRKSIRPDYL 362
           T  SPPLVS  +SRVAPGE  RG+DG+ A SERS RSG+GDGRRVGREESGRK+ RPD+L
Sbjct: 112 T--SPPLVSIGSSRVAPGEIGRGNDGITAPSERSSRSGLGDGRRVGREESGRKNDRPDFL 169

Query: 363 EFSQGQPLNEAGKSLAEDVIXXXXXXXXXXXXXXGKNVQDVHVKTLSEQLNDVPLDSDDL 542
           + +  +PL + GKSLAEDVI              GKNV+D  VKTLSEQLNDVPLDSDDL
Sbjct: 170 DVNPEEPLYQGGKSLAEDVISRHSESKARKSKQRGKNVRDAQVKTLSEQLNDVPLDSDDL 229

Query: 543 ASSNIHFRGRLPRQEKIIKEAEASMRGHGSGMNXXXXXXXXXXXXXXXXXXXXDIGAENE 722
           ASSNIHFRGR PRQEK+I+E E+ MR HGSGMN                    DIGAENE
Sbjct: 230 ASSNIHFRGRFPRQEKVIEEVESRMRSHGSGMNKGKRRKFRSVRRTRVATTSRDIGAENE 289

Query: 723 LSVASNSIAQGSAHQKYHSEEVDDYADENVTRAPKNGCGIPWNWSRIHH 869
           +SVASNS+    AH KYH EE D++ADENVTRAPKNGCGIPWNWSRIHH
Sbjct: 290 ISVASNSL----AHHKYHLEEADEFADENVTRAPKNGCGIPWNWSRIHH 334


>ref|XP_002265273.1| PREDICTED: uncharacterized protein LOC100249702 [Vitis vinifera]
          Length = 1161

 Score =  257 bits (657), Expect = 2e-66
 Identities = 143/290 (49%), Positives = 188/290 (64%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3   DLVVLQRSRSLRDXXXXXXXXXXXXVVDLLFKRAENDAMAQDGRRSVGVDRRKEGRRLSG 182
           DL+VLQRSRSLRD            V+DLL K+ ENDA++++GRRSVG++RR+EGRRLSG
Sbjct: 52  DLIVLQRSRSLRDPSTSPPSWHSPSVIDLLSKKVENDAVSREGRRSVGIERRREGRRLSG 111

Query: 183 TGTSPPLVSKSTSRVAPGEASRGDDGVPATSERSIRSGMGDGRRVGREESGRKSIRPDYL 362
           +  SP + S +TS+VAPGE   G++G+ A SERS +SG+ DGRR+ REES R+S+R D L
Sbjct: 112 S--SPTVASLATSKVAPGEVVGGNNGIAAMSERSGKSGLRDGRRIKREESSRRSMRTDLL 169

Query: 363 EFSQGQPLNEAGKSLAEDVIXXXXXXXXXXXXXXGKNVQDVHVKTLSEQLNDVPLDSDDL 542
              +    ++ G     +++              GK  Q+V +KTLSEQL + P+DS D 
Sbjct: 170 GGYEEPSQDQDGNDSVNELVSGNSESKDKRVKQKGKLRQEVLLKTLSEQLKEFPVDS-DA 228

Query: 543 ASSNIHFRGRLPRQEKIIKEAEASMRGHGSGMNXXXXXXXXXXXXXXXXXXXXDIGAENE 722
           ASS+IH +GR  R+E+  +E EAS+RG+ SG+N                    DIGA+NE
Sbjct: 229 ASSHIHLQGRRTRKERTGEEPEASIRGYCSGLNRIKKRKFRGARRNRAAIGLRDIGAQNE 288

Query: 723 LSVASNSIAQGSAHQKYH-SEEVDDYADENVTRAPKNGCGIPWNWSRIHH 869
           LSVASNS AQGS   K    EE ++Y + NVTRAP+NGCGIPWNWSRIHH
Sbjct: 289 LSVASNSFAQGSVCLKNEMEEEREEYGERNVTRAPRNGCGIPWNWSRIHH 338


>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score =  246 bits (627), Expect = 6e-63
 Identities = 139/290 (47%), Positives = 178/290 (61%), Gaps = 1/290 (0%)
 Frame = +3

Query: 3   DLVVLQRSRSLRDXXXXXXXXXXXXVVDLLFKRAENDAMAQDGRRSVGVDRRKEGRRLSG 182
           DL+VLQRSRSLRD            VVDLL K+ + DA   +GRRS+G++RR+EGRRLSG
Sbjct: 52  DLIVLQRSRSLRDPSASPPSWHSPSVVDLLPKKGDKDAAVTEGRRSIGIERRREGRRLSG 111

Query: 183 TGTSPPLVSKSTSRVAPGEASRGDDGVPAT-SERSIRSGMGDGRRVGREESGRKSIRPDY 359
              SPP  + + S+V PGE S G +GV A  S+RS +SG  DGRR+ REES RKS R D 
Sbjct: 112 G--SPPFANLAPSKVVPGELSGGYEGVAAAVSDRSSKSGARDGRRIKREESSRKSNRADL 169

Query: 360 LEFSQGQPLNEAGKSLAEDVIXXXXXXXXXXXXXXGKNVQDVHVKTLSEQLNDVPLDSDD 539
           L   +    N+    L  D +              GK+ QD H+KTLS+QLN++P+DSD 
Sbjct: 170 LGGDEDLSHNQEVNGLVNDDVSGNSESKSRKSKHKGKHSQDFHIKTLSDQLNEIPMDSDV 229

Query: 540 LASSNIHFRGRLPRQEKIIKEAEASMRGHGSGMNXXXXXXXXXXXXXXXXXXXXDIGAEN 719
            ASSN+H  GR  +Q+K  +E E S+RG+ SG+N                    D+  +N
Sbjct: 230 AASSNVHLHGRRSQQDKTGEERETSIRGY-SGIN-RTKRRKFRGARRTRATPARDVEGQN 287

Query: 720 ELSVASNSIAQGSAHQKYHSEEVDDYADENVTRAPKNGCGIPWNWSRIHH 869
           E+SVASNS+ QGS   +Y  EE ++Y D NVTRAP+NGCGIPWNWSRIHH
Sbjct: 288 EMSVASNSLNQGSVRPRYCIEE-EEYGDPNVTRAPRNGCGIPWNWSRIHH 336


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