BLASTX nr result

ID: Glycyrrhiza23_contig00025760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025760
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   119   2e-25
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   119   2e-25
ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806...   115   5e-24
ref|XP_003616119.1| Regulator of nonsense transcripts-like prote...    98   6e-19
ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago trunca...    98   8e-19

>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
           [Glycine max]
          Length = 925

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/87 (70%), Positives = 71/87 (81%)
 Frame = -2

Query: 272 MERSCNAIGKDVDLASLVETVFSWTLKDVLNENLCKHKVRKIPLTFMSTKDYMSYFIPSL 93
           MERSC A   +  L  LVETVF+W+LKDVLN+NLCKHKV KIP TF+ST DY++ FIPSL
Sbjct: 1   MERSCIAKDNEEGL-DLVETVFNWSLKDVLNDNLCKHKVLKIPQTFLSTTDYLNSFIPSL 59

Query: 92  IEETHSDLSSSLYGVSRAPFCEISTVE 12
           IEET SDL S+L GVSRA FCEIS++E
Sbjct: 60  IEETRSDLCSNLKGVSRASFCEISSIE 86


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago
           truncatula] gi|355489654|gb|AES70857.1| DNA polymerase
           alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  119 bits (299), Expect = 2e-25
 Identities = 59/87 (67%), Positives = 70/87 (80%), Gaps = 2/87 (2%)
 Frame = -2

Query: 263 SCNAIGKDVDLASLVETVFSWTLKDVLNENLCKHKVRKIPLTFMSTKDYMSYFIPSLIEE 84
           S N   +D+DLASLVE VFSWT  DV N+N C+HKV KIP TFM+  +Y++ FIPSL+EE
Sbjct: 2   SFNVEREDLDLASLVEIVFSWTFNDVRNQNFCRHKVEKIPHTFMTVTNYLNSFIPSLVEE 61

Query: 83  THSDLSSSLYGVSRAPFCE--ISTVER 9
           THSDLSSSLYGV+RAPFCE  I+T ER
Sbjct: 62  THSDLSSSLYGVNRAPFCEILIATPER 88


>ref|XP_003544348.1| PREDICTED: uncharacterized protein LOC100806346 [Glycine max]
          Length = 975

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/93 (61%), Positives = 72/93 (77%)
 Frame = -2

Query: 284 KEPMMERSCNAIGKDVDLASLVETVFSWTLKDVLNENLCKHKVRKIPLTFMSTKDYMSYF 105
           ++ + + +CNA  +D + AS ++ VFSW+LKD LNE+L KHKV++IP TFMST DY++ F
Sbjct: 31  RQELAKITCNASEEDDESASFLDIVFSWSLKDALNEDLYKHKVQRIPETFMSTSDYLNSF 90

Query: 104 IPSLIEETHSDLSSSLYGVSRAPFCEISTVERD 6
           IP LIEET SDL SSL GVSRAP CEI TV RD
Sbjct: 91  IPPLIEETRSDLCSSLKGVSRAPICEIWTVIRD 123


>ref|XP_003616119.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355517454|gb|AES99077.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 860

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/86 (59%), Positives = 59/86 (68%)
 Frame = -2

Query: 272 MERSCNAIGKDVDLASLVETVFSWTLKDVLNENLCKHKVRKIPLTFMSTKDYMSYFIPSL 93
           M+++ NA   D     L++ V SW L+DVLNENL KHKV KIP TF S  DY + FIP L
Sbjct: 1   MDKTSNASEGDAKPRRLLDIVLSWPLEDVLNENLYKHKVHKIPETFKSATDYKNSFIPLL 60

Query: 92  IEETHSDLSSSLYGVSRAPFCEISTV 15
            EET +DLSSSL GVSRAP CEI  V
Sbjct: 61  CEETRTDLSSSLSGVSRAPICEIKKV 86


>ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
           gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2
           [Medicago truncatula]
          Length = 1046

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/87 (57%), Positives = 61/87 (70%)
 Frame = -2

Query: 272 MERSCNAIGKDVDLASLVETVFSWTLKDVLNENLCKHKVRKIPLTFMSTKDYMSYFIPSL 93
           ME++ N   +++ L SL++ V SWTL+D LNENL K KV KIP TF S  DY + FIP L
Sbjct: 33  MEKTRNGSEENLKLGSLIDIVLSWTLEDALNENLYKDKVHKIPETFKSATDYKNSFIPLL 92

Query: 92  IEETHSDLSSSLYGVSRAPFCEISTVE 12
            EET +DLSSSL GVS+A  CEI  VE
Sbjct: 93  FEETRADLSSSLSGVSQAALCEIKNVE 119


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