BLASTX nr result

ID: Glycyrrhiza23_contig00025749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025749
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [...   250   1e-64
ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   249   2e-64
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu...   239   1e-61
ref|XP_002311345.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   233   2e-59

>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
          Length = 705

 Score =  250 bits (638), Expect = 1e-64
 Identities = 125/134 (93%), Positives = 130/134 (97%)
 Frame = -1

Query: 404 LYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLF 225
           LYPE EFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSR AIIKSLEQLF
Sbjct: 408 LYPEREFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLF 467

Query: 224 LLGALTDDCQLSDPVGRQMARLPLDPVYSKALILASQFNCLEEMLITVAMLSVESIFYTP 45
           LLGALTD+CQLSDPVG QMARLPLDP+YSKALILASQFNCLEEMLITVA+LSVESIFY+P
Sbjct: 468 LLGALTDECQLSDPVGHQMARLPLDPLYSKALILASQFNCLEEMLITVALLSVESIFYSP 527

Query: 44  RDKYDEARTATKCF 3
           RDK +EARTATKCF
Sbjct: 528 RDKLEEARTATKCF 541


>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score =  249 bits (635), Expect = 2e-64
 Identities = 124/134 (92%), Positives = 130/134 (97%)
 Frame = -1

Query: 404 LYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLF 225
           LYPE EFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFI+KPSR AIIKSLEQLF
Sbjct: 408 LYPEREFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIDKPSRAAIIKSLEQLF 467

Query: 224 LLGALTDDCQLSDPVGRQMARLPLDPVYSKALILASQFNCLEEMLITVAMLSVESIFYTP 45
           LLGALTD+CQLSDPVG QMARLPLDP+YSKALILASQFNCLEEMLITVA+LSVESIFY+P
Sbjct: 468 LLGALTDECQLSDPVGHQMARLPLDPLYSKALILASQFNCLEEMLITVALLSVESIFYSP 527

Query: 44  RDKYDEARTATKCF 3
           RDK +EARTATKCF
Sbjct: 528 RDKLEEARTATKCF 541


>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 690

 Score =  239 bits (611), Expect = 1e-61
 Identities = 119/134 (88%), Positives = 126/134 (94%)
 Frame = -1

Query: 404 LYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLF 225
           LYPE EFEKLEDST PEIKRCNLSNVILQLKALGVDDI+GFDFIEKPSR AIIKSLE LF
Sbjct: 388 LYPEREFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFIEKPSRAAIIKSLEHLF 447

Query: 224 LLGALTDDCQLSDPVGRQMARLPLDPVYSKALILASQFNCLEEMLITVAMLSVESIFYTP 45
           LLGALTD+C+LSDPVG QMARLPLDP+YSKALILASQFNCLEEMLITVAMLSVESIFY P
Sbjct: 448 LLGALTDECKLSDPVGHQMARLPLDPIYSKALILASQFNCLEEMLITVAMLSVESIFYAP 507

Query: 44  RDKYDEARTATKCF 3
           R+K +E+RTA KCF
Sbjct: 508 REKSEESRTAMKCF 521


>ref|XP_002311345.1| predicted protein [Populus trichocarpa] gi|222851165|gb|EEE88712.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  236 bits (601), Expect = 2e-60
 Identities = 116/134 (86%), Positives = 126/134 (94%)
 Frame = -1

Query: 404 LYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLF 225
           LYPE+EFEKLEDST PEIKRCNLSNVILQLKALGVDDI+GFDF+EKPSR AI KSLE+LF
Sbjct: 357 LYPESEFEKLEDSTKPEIKRCNLSNVILQLKALGVDDIIGFDFLEKPSRAAIQKSLEELF 416

Query: 224 LLGALTDDCQLSDPVGRQMARLPLDPVYSKALILASQFNCLEEMLITVAMLSVESIFYTP 45
           LLGALTDDC+LSDPVG QMARLPLDP+YSKALILASQFNCLEEMLI V+MLSVESIFY P
Sbjct: 417 LLGALTDDCKLSDPVGHQMARLPLDPIYSKALILASQFNCLEEMLIAVSMLSVESIFYNP 476

Query: 44  RDKYDEARTATKCF 3
           R+K +EA+TA KCF
Sbjct: 477 REKSEEAKTAKKCF 490


>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score =  233 bits (593), Expect = 2e-59
 Identities = 115/134 (85%), Positives = 126/134 (94%)
 Frame = -1

Query: 404 LYPENEFEKLEDSTMPEIKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLF 225
           LYPE+EF +L DST PEIKRCNLSNVILQLKALGVDDI+GFDF+EKPSR+AI+KSLEQLF
Sbjct: 416 LYPESEFGQLADSTEPEIKRCNLSNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLF 475

Query: 224 LLGALTDDCQLSDPVGRQMARLPLDPVYSKALILASQFNCLEEMLITVAMLSVESIFYTP 45
           LLGA+TDD +LSDP+G QMARLPLDPVYSKALILASQFNCLEEMLI VAMLSVESIFYTP
Sbjct: 476 LLGAITDDSKLSDPIGHQMARLPLDPVYSKALILASQFNCLEEMLIAVAMLSVESIFYTP 535

Query: 44  RDKYDEARTATKCF 3
           R+K +EARTA KCF
Sbjct: 536 REKLEEARTAMKCF 549


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