BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025725
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   139   3e-31
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   135   3e-30
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...   134   8e-30
gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptas...   132   3e-29
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]              120   1e-25

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/139 (48%), Positives = 89/139 (64%)
 Frame = -1

Query: 417  RQGDPLSPYLFVLCMERLGNLITREVQLEKWVPLSLSKGGPKISHLFFADDVLLFAKARP 238
            RQGDPLSPYLF+LCME+L   I   V    W P+ +   GP+ISHL FADDVLLF KA+ 
Sbjct: 636  RQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKS 695

Query: 237  SQARLVANVLDEFCAISGMKVSLDKSRALASKGVTQARKNKLQGITQIAFTSNLGKYLGF 58
            SQ + + N+ D F   SG+K+++ KSRA  S G    + N L  I+ I  T+ LGKYLGF
Sbjct: 696  SQLQFITNLFDRFSRASGLKINISKSRAYYSSGTPNGKINNLTAISGIQSTTTLGKYLGF 755

Query: 57   KIFHERPKKEDFADIIGRV 1
             +   RPK+ DF  I+ ++
Sbjct: 756  PMLQGRPKRSDFNFILEKM 774


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score =  135 bits (341), Expect = 3e-30
 Identities = 67/139 (48%), Positives = 93/139 (66%)
 Frame = -1

Query: 417 RQGDPLSPYLFVLCMERLGNLITREVQLEKWVPLSLSKGGPKISHLFFADDVLLFAKARP 238
           RQGDPLSPYLFVLC+ERL +LI   V   +W P+++S GG K+SH+ FADD++LFA+A  
Sbjct: 497 RQGDPLSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASV 556

Query: 237 SQARLVANVLDEFCAISGMKVSLDKSRALASKGVTQARKNKLQGITQIAFTSNLGKYLGF 58
           +Q R++  VL+ FC  SG KVSL+KS+   S  V++  +  +   + I  T  LGKYLG 
Sbjct: 557 AQIRIIRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGM 616

Query: 57  KIFHERPKKEDFADIIGRV 1
            I  +R  KE F +++ RV
Sbjct: 617 PILQKRMNKETFGEVLERV 635


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score =  134 bits (337), Expect = 8e-30
 Identities = 67/139 (48%), Positives = 95/139 (68%)
 Frame = -1

Query: 417 RQGDPLSPYLFVLCMERLGNLITREVQLEKWVPLSLSKGGPKISHLFFADDVLLFAKARP 238
           RQGDPLSPYLFVLC+ERL + I   V  ++W P+S+S+GGP +SH+ FADD++LFA+A  
Sbjct: 89  RQGDPLSPYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGPLLSHICFADDLILFAEASV 148

Query: 237 SQARLVANVLDEFCAISGMKVSLDKSRALASKGVTQARKNKLQGITQIAFTSNLGKYLGF 58
           +Q R+V  VL++FC  SG KVSL+KS+   S+ V +  +  +   + I  T  LGKYLG 
Sbjct: 149 AQIRVVRKVLEKFCIASGQKVSLEKSKIFFSQNVHRDLEKFISDESGIKSTKELGKYLGM 208

Query: 57  KIFHERPKKEDFADIIGRV 1
            +  +R  K+ F +I+ RV
Sbjct: 209 PVLQKRINKDTFGEILLRV 227


>gb|ABO80459.1| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 869

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/139 (48%), Positives = 90/139 (64%)
 Frame = -1

Query: 417 RQGDPLSPYLFVLCMERLGNLITREVQLEKWVPLSLSKGGPKISHLFFADDVLLFAKARP 238
           RQGDPLSPYLF++CME+L   I + V   +W P+ +S   P +SHL FADDVLLF KA+ 
Sbjct: 196 RQGDPLSPYLFIICMEKLSLAINKAVHEGEWEPIRMSASSPPLSHLLFADDVLLFTKAKN 255

Query: 237 SQARLVANVLDEFCAISGMKVSLDKSRALASKGVTQARKNKLQGITQIAFTSNLGKYLGF 58
           SQ R + ++ D F    G+K++L KSRA  S GV   +   L  I+ I  T++LGKYLGF
Sbjct: 256 SQLRFIKDLFDRFSKALGLKINLSKSRAFYS-GVPHQKIINLTSISGIRSTTSLGKYLGF 314

Query: 57  KIFHERPKKEDFADIIGRV 1
            I   RPK+ DF  II ++
Sbjct: 315 PILKGRPKRSDFLFIIEKM 333


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score =  120 bits (300), Expect = 1e-25
 Identities = 59/116 (50%), Positives = 81/116 (69%)
 Frame = -1

Query: 417 RQGDPLSPYLFVLCMERLGNLITREVQLEKWVPLSLSKGGPKISHLFFADDVLLFAKARP 238
           RQGD LSPYLFVLCMERL +LI R +  ++W P++LS+GGPK+SH+ FADD++LFA+A  
Sbjct: 74  RQGDLLSPYLFVLCMERLCHLIERSINAKQWKPINLSRGGPKLSHICFADDLILFAEASV 133

Query: 237 SQARLVANVLDEFCAISGMKVSLDKSRALASKGVTQARKNKLQGITQIAFTSNLGK 70
            Q ++V  VL+ FC  SG KVSL+KS+   SK V++     +   + I  T + GK
Sbjct: 134 EQVQIVRRVLEAFCTASGQKVSLEKSKIFFSKNVSRELGKLISDESGIQSTCDWGK 189