BLASTX nr result

ID: Glycyrrhiza23_contig00025723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025723
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73405.1| hypothetical protein VITISV_010053 [Vitis vinifera]    71   8e-11
emb|CBI14921.3| unnamed protein product [Vitis vinifera]               71   1e-10
emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]    71   1e-10
ref|XP_003622896.1| TMV resistance protein N [Medicago truncatul...    69   3e-10
gb|ABD32755.1| gag-pol polyprotein-related [Medicago truncatula]       69   5e-10

>emb|CAN73405.1| hypothetical protein VITISV_010053 [Vitis vinifera]
          Length = 768

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/74 (48%), Positives = 52/74 (70%)
 Frame = -3

Query: 224 LNVTGTMPEGVWILDSGATDHMSPWSLHFSSYSLVSGKQHVTVANGSHVSVAGCGNIQLQ 45
           +NV+  + +  WI+DSGATDHM+  S  F++Y+     + + VANGS V+VAG  +I + 
Sbjct: 14  INVSHRVYDDSWIIDSGATDHMTXKSQLFNTYTPSPSNKKIVVANGSLVTVAGFRDIYIT 73

Query: 44  PSLHLKDVLHVPKL 3
           P+L LK+VLHVPKL
Sbjct: 74  PTLILKNVLHVPKL 87


>emb|CBI14921.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/74 (47%), Positives = 51/74 (68%)
 Frame = -3

Query: 224 LNVTGTMPEGVWILDSGATDHMSPWSLHFSSYSLVSGKQHVTVANGSHVSVAGCGNIQLQ 45
           +N +  + +  WI+DSGATDHM+  S  F++Y+     + + VANGS V+V G G+I + 
Sbjct: 14  INASHRVYDESWIIDSGATDHMTSKSQLFNTYTPSPSNKKIVVANGSLVTVVGFGDIYIT 73

Query: 44  PSLHLKDVLHVPKL 3
           P+L LK+VLHVPKL
Sbjct: 74  PTLILKNVLHVPKL 87


>emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]
          Length = 1337

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/74 (48%), Positives = 51/74 (68%)
 Frame = -3

Query: 224 LNVTGTMPEGVWILDSGATDHMSPWSLHFSSYSLVSGKQHVTVANGSHVSVAGCGNIQLQ 45
           +N +  +    WI+DS ATDHM+  S  F++Y+L    + + VANGS V+VAG G+I + 
Sbjct: 285 INASHRVYNDSWIIDSDATDHMTFKSQLFNTYTLSPSNKKIVVANGSLVTVAGFGDIYIT 344

Query: 44  PSLHLKDVLHVPKL 3
           P+L LK+VLHVPKL
Sbjct: 345 PTLILKNVLHVPKL 358



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -3

Query: 224 LNVTGTMPEGVWILDSGATDHMSPWSLHFSSYSLVSGKQHVTVANGSHVSVAGCGNIQLQ 45
           +NV+  + +  WI+DS ATDHM+  S  F +Y+     + + VANGS  +VAG  +I + 
Sbjct: 32  INVSHKVYDDSWIIDSSATDHMTSKSQLFHTYTPSPSNKKIAVANGSLATVAGFRDIYIT 91

Query: 44  PSLHLKDVLH 15
           P+  LK+VLH
Sbjct: 92  PTFILKNVLH 101


>ref|XP_003622896.1| TMV resistance protein N [Medicago truncatula]
            gi|355497911|gb|AES79114.1| TMV resistance protein N
            [Medicago truncatula]
          Length = 1197

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/67 (52%), Positives = 45/67 (67%)
 Frame = -3

Query: 203  PEGVWILDSGATDHMSPWSLHFSSYSLVSGKQHVTVANGSHVSVAGCGNIQLQPSLHLKD 24
            P   WI+DSGATDHM+  S  FSSYS  +G   + +A+GS   VAG G++ + P L L+D
Sbjct: 875  PSRTWIVDSGATDHMTRESSMFSSYSPCAGNLKIKIADGSLSVVAGKGSVIISPLLTLQD 934

Query: 23   VLHVPKL 3
            VLHVP L
Sbjct: 935  VLHVPNL 941


>gb|ABD32755.1| gag-pol polyprotein-related [Medicago truncatula]
          Length = 238

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = -3

Query: 191 WILDSGATDHMSPWSLHFSSYS-LVSGKQHVTVANGSHVSVAGCGNIQLQPSLHLKDVLH 15
           WILDSGATDHM+P   HFS+YS   S K+++   +G+ ++VAG  ++QL P + L +VLH
Sbjct: 82  WILDSGATDHMTPLPTHFSTYSPCSSNKKNIYNRHGTLITVAGQWDVQLNPFMTLNNVLH 141

Query: 14  VPKL 3
           +PKL
Sbjct: 142 IPKL 145


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