BLASTX nr result

ID: Glycyrrhiza23_contig00025719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025719
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593965.1| hypothetical protein MTR_2g019840 [Medicago ...    90   2e-16
ref|XP_003593962.1| hypothetical protein MTR_2g019810 [Medicago ...    89   4e-16
gb|AAB60760.1| F19K23.6 gene product [Arabidopsis thaliana]            75   7e-12
ref|NP_176403.1| Mitochondrial transcription termination factor ...    75   7e-12
ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257...    72   4e-11

>ref|XP_003593965.1| hypothetical protein MTR_2g019840 [Medicago truncatula]
           gi|355483013|gb|AES64216.1| hypothetical protein
           MTR_2g019840 [Medicago truncatula]
          Length = 457

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/66 (63%), Positives = 56/66 (84%)
 Frame = +1

Query: 1   TASKLSNQIRLRNSDRPDSVLALFRSHGFSDAHISGIIRTFPKLLTFDPQKTILPKLNFL 180
           TASKLS +++L NS +PDSVL LF+S+GFS++ +S +I+T+P LL+ +P KTILPK NFL
Sbjct: 60  TASKLSKRLQLNNSQKPDSVLLLFKSYGFSNSQLSTLIKTYPNLLSVNPNKTILPKFNFL 119

Query: 181 LSKGAS 198
           LSKGAS
Sbjct: 120 LSKGAS 125


>ref|XP_003593962.1| hypothetical protein MTR_2g019810 [Medicago truncatula]
           gi|355483010|gb|AES64213.1| hypothetical protein
           MTR_2g019810 [Medicago truncatula]
          Length = 366

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/66 (63%), Positives = 55/66 (83%)
 Frame = +1

Query: 1   TASKLSNQIRLRNSDRPDSVLALFRSHGFSDAHISGIIRTFPKLLTFDPQKTILPKLNFL 180
           TASKLS ++ L NS +PDSVLALF+S+GFS++ +S +I+T   +L++DP KTILPK NFL
Sbjct: 48  TASKLSKRVLLNNSQKPDSVLALFKSYGFSNSQLSSLIKTRTDILSYDPNKTILPKFNFL 107

Query: 181 LSKGAS 198
           LSKGAS
Sbjct: 108 LSKGAS 113


>gb|AAB60760.1| F19K23.6 gene product [Arabidopsis thaliana]
          Length = 827

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +1

Query: 4   ASKLSNQIRLRNSDRPDSVLALFRSHGFSDAHISGIIRTFPKLLTFDPQKTILPKLNFLL 183
           A  +S ++   N   PDSVL+L RSHGF+D+ IS IIRTFP+LL  D +K++ PKL FL 
Sbjct: 73  AESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQ 132

Query: 184 SKGAS 198
           S GAS
Sbjct: 133 SIGAS 137



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +1

Query: 4   ASKLSNQIRLRNSDRPDSVLALFRSHGFSDAHISGIIRTFPKLLTFDPQKTILPKLNFLL 183
           A  +S ++   N   PD VL+LFRS+GF+++ IS II  +P+LL  D +K++  KL FL 
Sbjct: 452 AESISKKVSFVNKGNPDLVLSLFRSYGFTNSQISSIITDYPRLLLIDAEKSLDIKLQFLE 511

Query: 184 SKGAS 198
           S+GAS
Sbjct: 512 SRGAS 516


>ref|NP_176403.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|50253494|gb|AAT71949.1|
           At1g62120 [Arabidopsis thaliana]
           gi|53850523|gb|AAU95438.1| At1g62120 [Arabidopsis
           thaliana] gi|332195804|gb|AEE33925.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 437

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 36/65 (55%), Positives = 46/65 (70%)
 Frame = +1

Query: 4   ASKLSNQIRLRNSDRPDSVLALFRSHGFSDAHISGIIRTFPKLLTFDPQKTILPKLNFLL 183
           A  +S ++   N   PDSVL+L RSHGF+D+ IS IIRTFP+LL  D +K++ PKL FL 
Sbjct: 73  AESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQ 132

Query: 184 SKGAS 198
           S GAS
Sbjct: 133 SIGAS 137


>ref|XP_002274817.1| PREDICTED: uncharacterized protein LOC100257952 [Vitis vinifera]
          Length = 389

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/66 (54%), Positives = 46/66 (69%)
 Frame = +1

Query: 1   TASKLSNQIRLRNSDRPDSVLALFRSHGFSDAHISGIIRTFPKLLTFDPQKTILPKLNFL 180
           +ASKL   +R    ++PDSVLA F SHGFS +  S I+++ P+LL  DP KT+LPKL F 
Sbjct: 73  SASKL---LRFETPEKPDSVLAFFNSHGFSKSQTSKIVKSLPRLLASDPDKTLLPKLQFF 129

Query: 181 LSKGAS 198
            SKGAS
Sbjct: 130 YSKGAS 135


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