BLASTX nr result

ID: Glycyrrhiza23_contig00025675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025675
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589616.1| ATP-dependent DNA helicase recG [Medicago tr...   197   6e-49
ref|XP_003601365.1| ATP-dependent DNA helicase recG [Medicago tr...   135   3e-30
ref|XP_003530343.1| PREDICTED: ATP-dependent DNA helicase recG-l...   134   6e-30
emb|CBI26906.3| unnamed protein product [Vitis vinifera]              104   8e-21
ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...   102   3e-20

>ref|XP_003589616.1| ATP-dependent DNA helicase recG [Medicago truncatula]
           gi|355478664|gb|AES59867.1| ATP-dependent DNA helicase
           recG [Medicago truncatula]
          Length = 618

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/139 (68%), Positives = 108/139 (77%)
 Frame = +1

Query: 19  CFSCKQLRSVVVFQGKGGYSIYFNRRMRCSNFLPFKFSKMCYRLKHKLTEKKFVETDQRG 198
           C SCKQLR+V++FQGK GYS  F+ +MRC NFLPFKFSKMCYR+KHK T++K VE DQ G
Sbjct: 23  CMSCKQLRTVILFQGKTGYSNPFSTKMRCCNFLPFKFSKMCYRMKHKFTDQKVVEIDQHG 82

Query: 199 XXXXXXXXXXXFALMDYNIPDLIGNGRGEMKSKMNLKDTLDDLDISLICKRFPSITLGSA 378
                      FALMD+NIPDLIGNG GEMKSKMN KD +DD DISL+C+ FPSITLGSA
Sbjct: 83  VKSTVKLRKKVFALMDHNIPDLIGNGSGEMKSKMNRKDAVDDFDISLMCRIFPSITLGSA 142

Query: 379 PQVDLYDGAASYSETTNIS 435
           PQV LYDG  +YSET  IS
Sbjct: 143 PQVGLYDGTTAYSETNIIS 161


>ref|XP_003601365.1| ATP-dependent DNA helicase recG [Medicago truncatula]
           gi|355490413|gb|AES71616.1| ATP-dependent DNA helicase
           recG [Medicago truncatula]
          Length = 565

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/100 (66%), Positives = 74/100 (74%)
 Frame = +1

Query: 136 MCYRLKHKLTEKKFVETDQRGXXXXXXXXXXXFALMDYNIPDLIGNGRGEMKSKMNLKDT 315
           MCYR+KHK T++K VE DQ G           FALMD+NIPDLIGNG GEMKSKMN KD 
Sbjct: 1   MCYRMKHKFTDQKVVEIDQHGVKSTVKLRKKVFALMDHNIPDLIGNGSGEMKSKMNRKDA 60

Query: 316 LDDLDISLICKRFPSITLGSAPQVDLYDGAASYSETTNIS 435
           +DD DISL+C+ FPSITLGS PQV LYDG  +YSET  IS
Sbjct: 61  VDDFDISLMCRIFPSITLGSPPQVGLYDGTTAYSETNIIS 100


>ref|XP_003530343.1| PREDICTED: ATP-dependent DNA helicase recG-like [Glycine max]
          Length = 1178

 Score =  134 bits (338), Expect = 6e-30
 Identities = 71/109 (65%), Positives = 75/109 (68%)
 Frame = +1

Query: 103 CSNFLPFKFSKMCYRLKHKLTEKKFVETDQRGXXXXXXXXXXXFALMDYNIPDLIGNGRG 282
           C  +  F  SKMCYRLKHKL EKK      RG            ALMDYN+PDLIGNG G
Sbjct: 228 CCRYCSFVPSKMCYRLKHKLAEKKVA----RGVGSGSKLRNKVVALMDYNLPDLIGNGSG 283

Query: 283 EMKSKMNLKDTLDDLDISLICKRFPSITLGSAPQVDLYDGAASYSETTN 429
           E KSKM+ KD LDDLDISLICKRFPSITLG AP+VDLYDG  S SET N
Sbjct: 284 EKKSKMSPKDALDDLDISLICKRFPSITLGYAPRVDLYDGTRSCSETMN 332


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score =  104 bits (259), Expect = 8e-21
 Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
 Frame = +1

Query: 16  MCFSCKQLRSVVVFQGKGGYSIYFNRRMRCSNFLPFKFSKMCYRLKHKLTEKKFVETDQR 195
           MC S K LR  + F+ + GY     R+MR SNFL  K SK+C R KHK  EK   E D  
Sbjct: 13  MCCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSY 72

Query: 196 GXXXXXXXXXXX---FALMDYN-IPDLIGNGRGEMKSKMNLKDTLDDLDISLICKRFPSI 363
           G                LM Y+ + DLI N R + +S MNLKD ++++DISL C++FPSI
Sbjct: 73  GKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRKFPSI 132

Query: 364 TLGSAPQVDLYDGAASYSETTNI 432
            LG++P V+LYD    +S+  ++
Sbjct: 133 ILGNSPPVELYDENKCHSDVRSL 155


>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score =  102 bits (254), Expect = 3e-20
 Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
 Frame = +1

Query: 19  CFSCKQLRSVVVFQGKGGYSIYFNRRMRCSNFLPFKFSKMCYRLKHKLTEKKFVETDQRG 198
           C S K LR  + F+ + GY     R+MR SNFL  K SK+C R KHK  EK   E D  G
Sbjct: 45  CCSEKPLRIAIAFEAERGYQNALGRKMRFSNFLLSKISKLCSRSKHKFPEKLLDEVDSYG 104

Query: 199 XXXXXXXXXXX---FALMDYN-IPDLIGNGRGEMKSKMNLKDTLDDLDISLICKRFPSIT 366
                           LM Y+ + DLI N R + +S MNLKD ++++DISL C++FPSI 
Sbjct: 105 KASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRKFPSII 164

Query: 367 LGSAPQVDLYDGAASYSETTNI 432
           LG++P V+LYD    +S+  ++
Sbjct: 165 LGNSPPVELYDENKCHSDVRSL 186


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