BLASTX nr result

ID: Glycyrrhiza23_contig00025662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025662
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]...   183   1e-44
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   181   4e-44
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   179   2e-43
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...   175   4e-42
ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|...   174   5e-42

>ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
            gi|355483599|gb|AES64802.1| Endoribonuclease Dicer
            [Medicago truncatula]
          Length = 1418

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/108 (79%), Positives = 95/108 (87%)
 Frame = -3

Query: 326  IGAFLSTGGEKAALLFMDWVGIKVSFNATPYERQFSVCSEKLVHVSLLESLLKYSFRDST 147
            IGAFLS GGE AALLFMDW+GIKV+FN  PYERQF  C + LV+V  LESLLKYSFRD +
Sbjct: 1134 IGAFLSAGGEMAALLFMDWIGIKVNFNIIPYERQFIACPDNLVNVRFLESLLKYSFRDRS 1193

Query: 146  LLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITRHLYKEYPGMSP 3
            LLVEALTHGSYMLP++PRCYQRLE+LGDSVLDYLIT HLY+ YPGMSP
Sbjct: 1194 LLVEALTHGSYMLPDVPRCYQRLEYLGDSVLDYLITMHLYRVYPGMSP 1241


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  181 bits (460), Expect = 4e-44
 Identities = 87/108 (80%), Positives = 95/108 (87%)
 Frame = -3

Query: 326  IGAFLSTGGEKAALLFMDWVGIKVSFNATPYERQFSVCSEKLVHVSLLESLLKYSFRDST 147
            IGAFLSTGGEKAALLFMDWVGIKVSFN  PY+R F +  EKLV+VS LES L YSF D +
Sbjct: 1101 IGAFLSTGGEKAALLFMDWVGIKVSFNKIPYDRHFDIQPEKLVNVSFLESQLNYSFHDRS 1160

Query: 146  LLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITRHLYKEYPGMSP 3
            LLVEA+THGSYMLPE+PRCYQRLEFLGDSVLDYLIT HLY +YPGM+P
Sbjct: 1161 LLVEAVTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNKYPGMTP 1208


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  179 bits (454), Expect = 2e-43
 Identities = 87/108 (80%), Positives = 94/108 (87%)
 Frame = -3

Query: 326  IGAFLSTGGEKAALLFMDWVGIKVSFNATPYERQFSVCSEKLVHVSLLESLLKYSFRDST 147
            IGAFLSTGGE +ALLFMDWVGIKVSF+  PYER F +  EKL++V  LES LKYSF D +
Sbjct: 1134 IGAFLSTGGEISALLFMDWVGIKVSFDKIPYERHFDIQPEKLLNVRFLESQLKYSFHDHS 1193

Query: 146  LLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITRHLYKEYPGMSP 3
            LLVEALTHGSYMLPE+PRCYQRLEFLGDSVLDYLIT HLY EYPGMSP
Sbjct: 1194 LLVEALTHGSYMLPEVPRCYQRLEFLGDSVLDYLITWHLYNEYPGMSP 1241


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/108 (77%), Positives = 92/108 (85%)
 Frame = -3

Query: 326  IGAFLSTGGEKAALLFMDWVGIKVSFNATPYERQFSVCSEKLVHVSLLESLLKYSFRDST 147
            IGA+LSTGGE  ALLFMDW+GIKV F  TPYER   + +EK V+V  LESLL YSF D +
Sbjct: 1172 IGAYLSTGGEVTALLFMDWIGIKVDFMNTPYERHIQLQAEKFVNVRYLESLLNYSFNDPS 1231

Query: 146  LLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITRHLYKEYPGMSP 3
            LLVEALTHGSYMLPEIPRCYQRLEFLGD+VLDYLIT H+YKEYPGMSP
Sbjct: 1232 LLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKEYPGMSP 1279


>ref|XP_002315119.1| dicer-like protein [Populus trichocarpa] gi|222864159|gb|EEF01290.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1408

 Score =  174 bits (442), Expect = 5e-42
 Identities = 84/108 (77%), Positives = 91/108 (84%)
 Frame = -3

Query: 326  IGAFLSTGGEKAALLFMDWVGIKVSFNATPYERQFSVCSEKLVHVSLLESLLKYSFRDST 147
            IGA+LSTGGE  AL FMDW+GIKV F   PYER F + +EK V+V  LESLL YSFRD +
Sbjct: 1111 IGAYLSTGGEVLALFFMDWIGIKVDFMIVPYERHFQLQAEKFVNVRYLESLLNYSFRDPS 1170

Query: 146  LLVEALTHGSYMLPEIPRCYQRLEFLGDSVLDYLITRHLYKEYPGMSP 3
            LLVEALTHGSYMLPEIP CYQRLEFLGD+VLDYLIT HLYKEYPGMSP
Sbjct: 1171 LLVEALTHGSYMLPEIPSCYQRLEFLGDAVLDYLITMHLYKEYPGMSP 1218


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