BLASTX nr result

ID: Glycyrrhiza23_contig00025659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025659
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   126   2e-27
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   126   2e-27
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...   125   3e-27
ref|XP_002313369.1| chromatin remodeling complex subunit [Populu...   125   3e-27
gb|AAZ32872.1| putative chromodomain-helicase-DNA-binding protei...   124   8e-27

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/91 (70%), Positives = 65/91 (71%)
 Frame = +1

Query: 1    QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAXXXXXXXXXXXXXXK 180
            QYYKWILERNFH+LNKGVRGNQVSLLNIVVELKKCCNHPFLFESA              K
Sbjct: 880  QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSK 939

Query: 181  LERIVFSSGXXXXXXXXXXXXHETKHRVLIF 273
            LERIVFSSG            HETKHRVLIF
Sbjct: 940  LERIVFSSGKLVILDKLLVKLHETKHRVLIF 970


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  126 bits (317), Expect = 2e-27
 Identities = 64/91 (70%), Positives = 65/91 (71%)
 Frame = +1

Query: 1    QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAXXXXXXXXXXXXXXK 180
            QYYKWILERNFH+LNKGVRGNQVSLLNIVVELKKCCNHPFLFESA              K
Sbjct: 883  QYYKWILERNFHNLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSK 942

Query: 181  LERIVFSSGXXXXXXXXXXXXHETKHRVLIF 273
            LERIVFSSG            HETKHRVLIF
Sbjct: 943  LERIVFSSGKLVILDKLLVKLHETKHRVLIF 973


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/91 (69%), Positives = 64/91 (70%)
 Frame = +1

Query: 1    QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAXXXXXXXXXXXXXXK 180
            QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESA              K
Sbjct: 834  QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGFNDSSK 893

Query: 181  LERIVFSSGXXXXXXXXXXXXHETKHRVLIF 273
            LERI+ SSG            HETKHRVLIF
Sbjct: 894  LERIILSSGKLVILDKLLVRLHETKHRVLIF 924


>ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222849777|gb|EEE87324.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1748

 Score =  125 bits (315), Expect = 3e-27
 Identities = 63/91 (69%), Positives = 64/91 (70%)
 Frame = +1

Query: 1    QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAXXXXXXXXXXXXXXK 180
            QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESA              K
Sbjct: 856  QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDISTNDSSK 915

Query: 181  LERIVFSSGXXXXXXXXXXXXHETKHRVLIF 273
            LERI+ SSG            HETKHRVLIF
Sbjct: 916  LERIILSSGKLVILDKLLVRLHETKHRVLIF 946


>gb|AAZ32872.1| putative chromodomain-helicase-DNA-binding protein [Medicago
           sativa]
          Length = 171

 Score =  124 bits (311), Expect = 8e-27
 Identities = 63/91 (69%), Positives = 64/91 (70%)
 Frame = +1

Query: 1   QYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAXXXXXXXXXXXXXXK 180
           QYYKWILERNF DLNKGVRGNQVSLLNIVVELKKCCNHPFLFESA              K
Sbjct: 53  QYYKWILERNFRDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSESSDSSK 112

Query: 181 LERIVFSSGXXXXXXXXXXXXHETKHRVLIF 273
           LE+IVFSSG            HETKHRVLIF
Sbjct: 113 LEKIVFSSGKLVILDKLLVRLHETKHRVLIF 143


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