BLASTX nr result

ID: Glycyrrhiza23_contig00025658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025658
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...    83   2e-14
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...    83   2e-14
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...    69   4e-10
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    61   1e-07

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1764

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/51 (74%), Positives = 45/51 (88%)
 Frame = +2

Query: 206 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECTDATSSEKEFDMNM 358
           MAFF++F +D VS GV+EDK QGQNA+R+  SVGN+CTDATSSEKEFDMNM
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNM 51


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
           [Glycine max]
          Length = 1767

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/51 (74%), Positives = 45/51 (88%)
 Frame = +2

Query: 206 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECTDATSSEKEFDMNM 358
           MAFF++F +D VS GV+EDK QGQNA+R+  SVGN+CTDATSSEKEFDMNM
Sbjct: 1   MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNM 51


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355518633|gb|AET00257.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1739

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/51 (64%), Positives = 40/51 (78%)
 Frame = +2

Query: 206 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECTDATSSEKEFDMNM 358
           MAFF++F +D VS G +EDK  GQ+A+ I  SVGNE TD TSSEKEFDMN+
Sbjct: 1   MAFFRNFVNDTVSHGAMEDKGLGQDANNIHRSVGNEYTDGTSSEKEFDMNL 51


>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/48 (56%), Positives = 38/48 (79%)
 Frame = +2

Query: 206 MAFFKDFPHDAVSPGVLEDKVQGQNADRIRSSVGNECTDATSSEKEFD 349
           MAFF+++ ++ V+  VL++K QGQN DR+ SSV NE  DATSSEK+F+
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFE 48


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