BLASTX nr result

ID: Glycyrrhiza23_contig00025647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025647
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat...   162   3e-38
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   134   6e-30
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              134   6e-30
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]   134   6e-30
ref|XP_002527400.1| pentatricopeptide repeat-containing protein,...   131   5e-29

>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score =  162 bits (409), Expect = 3e-38
 Identities = 75/81 (92%), Positives = 80/81 (98%)
 Frame = +2

Query: 2   NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
           NILVGNGLINMYMKCGDFKEGHLVFDNI+GRDLISWNSLIGGYGMHGLGENALRTF+EMI
Sbjct: 444 NILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNEMI 503

Query: 182 KAGLKPDNITFVAVLSACSHA 244
           +A +KPDNITFVA+LSACSHA
Sbjct: 504 RARMKPDNITFVAILSACSHA 524



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/78 (35%), Positives = 47/78 (60%)
 Frame = +2

Query: 11  VGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMIKAG 190
           V N L+ MY K G  ++   +FD +  R ++SWN+++ GY ++     A R F  M   G
Sbjct: 169 VVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEG 228

Query: 191 LKPDNITFVAVLSACSHA 244
           L+P+++T+ ++LS  SHA
Sbjct: 229 LQPNSVTWTSLLS--SHA 244


>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/81 (74%), Positives = 72/81 (88%)
 Frame = +2

Query: 2    NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
            NILVGNGLINMY K G FKEG+LVF+ I+ +DLISWN+++ GYG+HGLGENA+RTFD+MI
Sbjct: 1283 NILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMI 1342

Query: 182  KAGLKPDNITFVAVLSACSHA 244
            K G +PD +TFVAVLSACSHA
Sbjct: 1343 KDGFEPDGVTFVAVLSACSHA 1363



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = +2

Query: 2    NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
            N+ VGN L+ MY K G   +   VF+ +  R  +SWN+++ GY ++     A   F  M 
Sbjct: 1007 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 1066

Query: 182  KAGLKPDNITFVAVLSACSHA 244
             AGL+P+ +T+ ++LS  SHA
Sbjct: 1067 SAGLEPNLVTWTSLLS--SHA 1085


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/81 (74%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
           NILVGNGLINMY K G FKEG+LVF+ I+ +DLISWN+++ GYG+HGLGENA+RTFD+MI
Sbjct: 445 NILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMI 504

Query: 182 KAGLKPDNITFVAVLSACSHA 244
           K G +PD +TFVAVLSACSHA
Sbjct: 505 KDGFEPDGVTFVAVLSACSHA 525



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = +2

Query: 2   NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
           N+ VGN L+ MY K G   +   VF+ +  R  +SWN+++ GY ++     A   F  M 
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 228

Query: 182 KAGLKPDNITFVAVLSACSHA 244
            AGL+P+ +T+ ++LS  SHA
Sbjct: 229 SAGLEPNLVTWTSLLS--SHA 247


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/81 (74%), Positives = 72/81 (88%)
 Frame = +2

Query: 2   NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
           NILVGNGLINMY K G FKEG+LVF+ I+ +DLISWN+++ GYG+HGLGENA+RTFD+MI
Sbjct: 445 NILVGNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMI 504

Query: 182 KAGLKPDNITFVAVLSACSHA 244
           K G +PD +TFVAVLSACSHA
Sbjct: 505 KDGFEPDGVTFVAVLSACSHA 525



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 47/81 (58%)
 Frame = +2

Query: 2   NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
           N+ VGN L+ MY K G   +   VF+ +  R  +SWN+++ GY ++     A   F  M 
Sbjct: 169 NLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMG 228

Query: 182 KAGLKPDNITFVAVLSACSHA 244
            AGL+P+ +T+ ++LS  SHA
Sbjct: 229 SAGLEPNLVTWTSLLS--SHA 247


>ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533210|gb|EEF34966.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  131 bits (330), Expect = 5e-29
 Identities = 58/81 (71%), Positives = 69/81 (85%)
 Frame = +2

Query: 2   NILVGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMI 181
           NILVGNGL+NMY KCG  KEGH++F+  + +DLISWNS+I GYGMHGLG NAL TFD+MI
Sbjct: 352 NILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQMI 411

Query: 182 KAGLKPDNITFVAVLSACSHA 244
           K G KPD +TFVAVLS+CSH+
Sbjct: 412 KLGFKPDGVTFVAVLSSCSHS 432



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/74 (33%), Positives = 42/74 (56%)
 Frame = +2

Query: 11  VGNGLINMYMKCGDFKEGHLVFDNIKGRDLISWNSLIGGYGMHGLGENALRTFDEMIKAG 190
           VGN LI MY K G  ++   +FD +  R  ISWN+++  Y  +     AL  F  M   G
Sbjct: 79  VGNELIGMYAKLGRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEG 138

Query: 191 LKPDNITFVAVLSA 232
           ++P+ +T+ +++S+
Sbjct: 139 MEPNLVTWTSLISS 152


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