BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025634
         (1543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523903.1| PREDICTED: transcription initiation factor T...   465   e-128
ref|XP_003533464.1| PREDICTED: transcription initiation factor T...   444   e-122
ref|XP_003612586.1| Transcription initiation factor TFIID subuni...   303   8e-80
emb|CBI21835.3| unnamed protein product [Vitis vinifera]              247   7e-63
ref|XP_002522626.1| transcription initiation factor tfiid, putat...   241   3e-61

>ref|XP_003523903.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Glycine max]
          Length = 1919

 Score =  465 bits (1197), Expect = e-128
 Identities = 246/316 (77%), Positives = 251/316 (79%)
 Frame = -3

Query: 950 MGYDSDSPSQDGRXXXXXXXXXESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 771
           MGYDSDSPSQDGR         ESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL
Sbjct: 1   MGYDSDSPSQDGRDEDDEEEYEESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 60

Query: 770 ADKLGPSLTDIDLSGKSPQTPPDVVEQDCGAKXXXXXXXXXXXXXXDGPETETANEEDYL 591
           ADKLGPSLTDIDLSGKSPQTPPDVVEQ C  K              DGPETE ANEEDYL
Sbjct: 61  ADKLGPSLTDIDLSGKSPQTPPDVVEQGCDVKAEDAVDYEDIDEEYDGPETEAANEEDYL 120

Query: 590 LPKMXXXXXXXXXXXXXXXXSVFDDENYDEESEKEQDLVNDDAKVDNISLAGEQEESFVD 411
           LPK                  VFDDENYDE+SEKEQD VNDD KVDNI LAGEQ+ESFVD
Sbjct: 121 LPKKEFFSAEASVCLESKAS-VFDDENYDEDSEKEQDFVNDDCKVDNIPLAGEQKESFVD 179

Query: 410 ASKGESALEHDLQVGSLQTEELDNDVQKPEEEGPEVLKRSMAAPLPVLYVEDGKAILRFS 231
           ASK ES+LEH+L V S QTEELD DVQK EEE PEV KRSMA PLPVL VEDG  ILRFS
Sbjct: 180 ASKEESSLEHELHVDSPQTEELDADVQKLEEESPEVPKRSMAMPLPVLCVEDGVTILRFS 239

Query: 230 EIFGIHEPLRKGEKREHRHSIPRDRYKSLDLSDDIVEEDEEEFLKSFSQSLSLTKQVCVV 51
           EIFGIHEPLRKGEKREHRHSIPRDRYKSLDL DD +EEDEEEFLK FSQSLSLTKQVCVV
Sbjct: 240 EIFGIHEPLRKGEKREHRHSIPRDRYKSLDLIDDFIEEDEEEFLKGFSQSLSLTKQVCVV 299

Query: 50  RTDVSESNDVDLEFPK 3
             DVSESNDVDLEFPK
Sbjct: 300 HNDVSESNDVDLEFPK 315


>ref|XP_003533464.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
            [Glycine max]
          Length = 1910

 Score =  444 bits (1141), Expect = e-122
 Identities = 243/337 (72%), Positives = 251/337 (74%), Gaps = 21/337 (6%)
 Frame = -3

Query: 950  MGYDSDSPSQDGRXXXXXXXXXESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 771
            MGYDSDSPSQDGR         +SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL
Sbjct: 1    MGYDSDSPSQDGRDEDDEEEYEDSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSAL 60

Query: 770  ADKLGPSLTDIDLSGKSPQTPPDVVEQDCGAKXXXXXXXXXXXXXXDGPETETANEEDYL 591
            ADKLGPSLTDID+  KSPQTPPDVVEQDC  K              DGPETE ANEEDYL
Sbjct: 61   ADKLGPSLTDIDVR-KSPQTPPDVVEQDCDVKAEDAVDYEDIDEEYDGPETEAANEEDYL 119

Query: 590  LPKMXXXXXXXXXXXXXXXXSVFDDENYDEESEKEQDLVNDDAKVDNISLA--------- 438
            LPK                  VFDDENYDEESEKEQD VNDD+KV NI LA         
Sbjct: 120  LPKKEFFSSEASVCLESKAS-VFDDENYDEESEKEQDFVNDDSKVYNIPLADLHVMLVSV 178

Query: 437  ------------GEQEESFVDASKGESALEHDLQVGSLQTEELDNDVQKPEEEGPEVLKR 294
                        GEQEESFVDASK ES+LEH+L V S QTEELD DVQK EE+GPEV KR
Sbjct: 179  LIKFTYASFVLSGEQEESFVDASKEESSLEHELHVDSPQTEELDADVQKLEEDGPEVQKR 238

Query: 293  SMAAPLPVLYVEDGKAILRFSEIFGIHEPLRKGEKREHRHSIPRDRYKSLDLSDDIVEED 114
            SMA PLPVL VEDG AILRFSEIFGIHEPLRKGEKREHRHSIPRD YKS DL+DD VEED
Sbjct: 239  SMAMPLPVLCVEDGVAILRFSEIFGIHEPLRKGEKREHRHSIPRDIYKSFDLTDDFVEED 298

Query: 113  EEEFLKSFSQSLSLTKQVCVVRTDVSESNDVDLEFPK 3
            EEEFLK FSQSLSL+KQVCVV  DVSESNDVDLEFPK
Sbjct: 299  EEEFLKGFSQSLSLSKQVCVVHNDVSESNDVDLEFPK 335


>ref|XP_003612586.1| Transcription initiation factor TFIID subunit 1-A [Medicago
           truncatula] gi|355513921|gb|AES95544.1| Transcription
           initiation factor TFIID subunit 1-A [Medicago
           truncatula]
          Length = 2196

 Score =  303 bits (776), Expect = 8e-80
 Identities = 167/228 (73%), Positives = 177/228 (77%)
 Frame = -3

Query: 686 CGAKXXXXXXXXXXXXXXDGPETETANEEDYLLPKMXXXXXXXXXXXXXXXXSVFDDENY 507
           CG K              DGPETETANEEDYLLPK                 SVFDDENY
Sbjct: 247 CGEKAEDAVDYEDIDEEYDGPETETANEEDYLLPKKDFFAAEASLEALERKTSVFDDENY 306

Query: 506 DEESEKEQDLVNDDAKVDNISLAGEQEESFVDASKGESALEHDLQVGSLQTEELDNDVQK 327
           DEES+KEQD VN++AKVDNISL+ EQEESFVDASK  SALEHDLQV SLQTEELD DVQ 
Sbjct: 307 DEESDKEQDFVNNEAKVDNISLSVEQEESFVDASKEGSALEHDLQV-SLQTEELDADVQT 365

Query: 326 PEEEGPEVLKRSMAAPLPVLYVEDGKAILRFSEIFGIHEPLRKGEKREHRHSIPRDRYKS 147
           PEE  PE LKRSMA PLPVLYV+DGKA+LRFSEIFGI EP RKGEK+E RHS PRDRYKS
Sbjct: 366 PEEV-PEFLKRSMATPLPVLYVDDGKAVLRFSEIFGIQEPPRKGEKKERRHSTPRDRYKS 424

Query: 146 LDLSDDIVEEDEEEFLKSFSQSLSLTKQVCVVRTDVSESNDVDLEFPK 3
            DLSDDIVEEDEEEFLK FS+SL+L KQVCVVRTDVSE N+VDLEFPK
Sbjct: 425 FDLSDDIVEEDEEEFLKGFSESLTLNKQVCVVRTDVSE-NNVDLEFPK 471



 Score =  126 bits (317), Expect = 1e-26
 Identities = 60/64 (93%), Positives = 62/64 (96%)
 Frame = -3

Query: 881 SGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPD 702
           SGKGN FLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSP+TPP 
Sbjct: 120 SGKGNHFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPRTPPG 179

Query: 701 VVEQ 690
           +VEQ
Sbjct: 180 IVEQ 183


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score =  247 bits (630), Expect = 7e-63
 Identities = 144/289 (49%), Positives = 182/289 (62%), Gaps = 6/289 (2%)
 Frame = -3

Query: 851 MFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPDVVEQDCGAKX 672
           MFGNVD +GDLD +Y+ +DAKEHL+ALADKLGPSLTDIDLS KSPQTP D  EQD   K 
Sbjct: 1   MFGNVDGAGDLDYNYVFQDAKEHLAALADKLGPSLTDIDLSVKSPQTPADGAEQDYDEKA 60

Query: 671 XXXXXXXXXXXXXDGPETETANEEDYLLPKMXXXXXXXXXXXXXXXXSVFDDENY--DEE 498
                        +GPE + A EEDYLL K                 SVFDD+NY  DEE
Sbjct: 61  EDAVNYEDIDEQYEGPEIQAATEEDYLLSKKEYFSADVSVASLDHSASVFDDDNYDEDEE 120

Query: 497 SEKEQDLVNDDAKVDNISLAGEQEESFVDASKGESALEHDLQVGSLQTEELDNDVQKPEE 318
            EKE ++V+++++V  IS +GEQ E     S+GE + + DL  G L+ E L  D++   E
Sbjct: 121 FEKEHEVVDNNSEVQAIS-SGEQGEHLSVVSEGEKSPDDDLFPGLLEPENLTGDLEDIPE 179

Query: 317 EGPEVLKR----SMAAPLPVLYVEDGKAILRFSEIFGIHEPLRKGEKREHRHSIPRDRYK 150
           E PE L+       +APLP+L VEDG  ILRFSEIFGIH PL+KGEKR+ R++IP++RYK
Sbjct: 180 EEPEGLEEPFEGKRSAPLPILCVEDGMVILRFSEIFGIHGPLKKGEKRDRRYTIPKERYK 239

Query: 149 SLDLSDDIVEEDEEEFLKSFSQSLSLTKQVCVVRTDVSESNDVDLEFPK 3
           S+D  D+ VEEDEE FLK   Q+ S TK   + + D S   + + E  K
Sbjct: 240 SMDAPDN-VEEDEEAFLKGGCQAFSFTKHKLLTQDDASVFMEDEAELKK 287


>ref|XP_002522626.1| transcription initiation factor tfiid, putative [Ricinus communis]
           gi|223538102|gb|EEF39713.1| transcription initiation
           factor tfiid, putative [Ricinus communis]
          Length = 1885

 Score =  241 bits (616), Expect = 3e-61
 Identities = 148/307 (48%), Positives = 184/307 (59%)
 Frame = -3

Query: 944 YDSDSPSQDGRXXXXXXXXXESGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALAD 765
           Y+S S SQD R         E G G+R LGFMFGNVDNSGDLDVDYLDEDAKEHL+ALAD
Sbjct: 4   YESGSASQDCRDEDDEEEYEEGGGGSRLLGFMFGNVDNSGDLDVDYLDEDAKEHLAALAD 63

Query: 764 KLGPSLTDIDLSGKSPQTPPDVVEQDCGAKXXXXXXXXXXXXXXDGPETETANEEDYLLP 585
           KLG SLTDID+  KSPQ   D  EQD   K              +GPE + A+EEDYLLP
Sbjct: 64  KLGSSLTDIDVL-KSPQITADAAEQDYDEKAENAVDYEDFDEQYEGPEIQAASEEDYLLP 122

Query: 584 KMXXXXXXXXXXXXXXXXSVFDDENYDEESEKEQDLVNDDAKVDNISLAGEQEESFVDAS 405
           K                 SVFDDENYDEE E++     ++ + +      E+EE   +A 
Sbjct: 123 KKEYFSSEVSLSTLKPTTSVFDDENYDEEEEEKGGGEGEEEEEEEEEEEAEEEEEEKEAE 182

Query: 404 KGESALEHDLQVGSLQTEELDNDVQKPEEEGPEVLKRSMAAPLPVLYVEDGKAILRFSEI 225
           K   A++  L+    Q   L + +++P +          +APLPVL VEDG  ILRFSEI
Sbjct: 183 KEHIAVDEKLED---QCISLSDAMEEPPD-------GKSSAPLPVLCVEDGLVILRFSEI 232

Query: 224 FGIHEPLRKGEKREHRHSIPRDRYKSLDLSDDIVEEDEEEFLKSFSQSLSLTKQVCVVRT 45
           FGIHEPL+KGEKR+ R+SI ++RYKS+D+S D VE+DEE FLK  SQ   L     V + 
Sbjct: 233 FGIHEPLKKGEKRDRRYSIFKERYKSMDVS-DFVEDDEEAFLKGSSQVFQLHSH--VNQY 289

Query: 44  DVSESND 24
           +++ SND
Sbjct: 290 EIAASND 296