BLASTX nr result

ID: Glycyrrhiza23_contig00025623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025623
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago tru...   125   5e-27
ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-li...    93   3e-17
ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ric...    92   4e-17
ref|XP_002303315.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-li...    87   1e-15

>ref|XP_003627047.1| Auxin-responsive protein IAA18 [Medicago truncatula]
           gi|355521069|gb|AET01523.1| Auxin-responsive protein
           IAA18 [Medicago truncatula]
          Length = 271

 Score =  125 bits (313), Expect = 5e-27
 Identities = 83/155 (53%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
 Frame = -3

Query: 436 MWQRSHKCS----SLELRLGPPGEESL--NENMKNVNKERDGSESPLTLGYFSTQKISTS 275
           MWQRSHKCS     LELRLGPPGEE     ++MKNV KERD  ES LTLGY         
Sbjct: 1   MWQRSHKCSLEERKLELRLGPPGEEEFVNEKSMKNVKKERD-EESSLTLGY--------- 50

Query: 274 HTPGPRGDAVFHHQHNPHQANAKASSFPQHQSSPQNMAVMGKDESQSQPCCVDLQDAEKN 95
                                AK SSF +  S    M VM  D SQSQPCC +LQD EKN
Sbjct: 51  ---------------------AKDSSFLKLSS----MQVM--DPSQSQPCCTNLQDGEKN 83

Query: 94  AFSPSSA----LPNRSHKRSAPGPVVGWPPIRSIR 2
            FSPSSA    LPNRS KR+A  PVVGWPPIRS R
Sbjct: 84  TFSPSSARNSALPNRSQKRNAASPVVGWPPIRSFR 118


>ref|XP_003543621.1| PREDICTED: auxin-responsive protein IAA26-like [Glycine max]
          Length = 346

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 71/156 (45%), Positives = 87/156 (55%), Gaps = 14/156 (8%)
 Frame = -3

Query: 427 RSHKCSSLELRLGPPGEE-SLNENMKNVNKERDGSESPLTLGYFSTQ------KISTSHT 269
           +S +   LELRLGPPGE+ SL   MKN N ER+  +S L+LG FS        +   SH 
Sbjct: 32  KSSEERKLELRLGPPGEDWSLGGKMKNNNTERE-DQSLLSLGCFSPNINSNAFQSKASH- 89

Query: 268 PGPRGDAVFHHQHNPHQANAKASSFPQHQSSPQNMAVMGKDESQSQPCCVDLQD--AEKN 95
           P P     +HH    +   A +SSF Q  SS Q + +MGKD S  +   V+LQ    +  
Sbjct: 90  PWPN----YHHHGQGNNKKASSSSFLQFPSSTQPV-MMGKDASCPK-VVVELQQNGGDGK 143

Query: 94  AFSPSSA-----LPNRSHKRSAPGPVVGWPPIRSIR 2
            FSPSSA      PN S KR+AP PVVGWPPIRS R
Sbjct: 144 VFSPSSANTAVSQPNTSQKRTAPAPVVGWPPIRSFR 179


>ref|XP_002515959.1| Auxin-responsive protein IAA6, putative [Ricinus communis]
           gi|223544864|gb|EEF46379.1| Auxin-responsive protein
           IAA6, putative [Ricinus communis]
          Length = 320

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 69/161 (42%), Positives = 88/161 (54%), Gaps = 20/161 (12%)
 Frame = -3

Query: 424 SHKCSSLELRLGPPGEE-SLNENMKNVNKERDGSESPLTLG---YFSTQ-----KISTSH 272
           S +   LELRL PPG+E SLN++ KN +  R+  ES L+LG   +F+ Q     K +T+ 
Sbjct: 35  SEEIKKLELRLAPPGQEWSLNDSTKNADINRERDESLLSLGASGWFNQQLSQQGKATTTT 94

Query: 271 TPGPRGDAVFHHQHNPHQANAKASSFPQHQ--SSPQNMAVMGKDESQSQPCC----VDLQ 110
           TP                       FP     ++ QN+ VM K+ SQ  PCC    VDLQ
Sbjct: 95  TPS-------------------FLQFPSKTVTTNAQNLPVMAKESSQ--PCCTKVVVDLQ 133

Query: 109 D-AEKNAFSP----SSALPNRSHKRSAPGPVVGWPPIRSIR 2
             AEK AFS     ++A+PN S KR+APGPVVGWPPIRS R
Sbjct: 134 QSAEKKAFSQPAPANTAVPNISQKRTAPGPVVGWPPIRSFR 174


>ref|XP_002303315.1| predicted protein [Populus trichocarpa] gi|222840747|gb|EEE78294.1|
           predicted protein [Populus trichocarpa]
          Length = 338

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 61/152 (40%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
 Frame = -3

Query: 406 LELRLGPPGEE-SLNENMKNVNKERDGSESPLTLGYFSTQKISTSHTPGPRGDA-VFHHQ 233
           LELRLGPPGE+ SL        +ER  S+  L+ GYF+     T   P    ++ V+ ++
Sbjct: 40  LELRLGPPGEDWSLKSTSNRERRERHKSQL-LSFGYFTNGNQQTHKFPSSAENSHVWFNK 98

Query: 232 HNPHQANAKASSFPQHQSSP------QNMAVMGKDESQSQPCCVDL-----QDAEKNAFS 86
               +      +FP   + P      Q++ VM  D+  SQPCC  +     Q AEK AFS
Sbjct: 99  KQQGKVPPSYLNFPSSSTPPTATATQQSLPVM--DKESSQPCCTKVVVELPQCAEKKAFS 156

Query: 85  P----SSALPNRSHKRSAPGPVVGWPPIRSIR 2
                ++A+PN S KR APGPVVGWPPIRS R
Sbjct: 157 TPAPANTAVPNSSQKRIAPGPVVGWPPIRSFR 188


>ref|XP_002283588.2| PREDICTED: auxin-responsive protein IAA26-like [Vitis vinifera]
          Length = 364

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 67/167 (40%), Positives = 83/167 (49%), Gaps = 32/167 (19%)
 Frame = -3

Query: 406 LELRLGPPGEESLNENMKNVNKERDGSESPLTLGYFSTQKI----------------STS 275
           LELRLGPPGE+   ++  N N  R+  ES   L Y S+                   +T+
Sbjct: 42  LELRLGPPGEDWTIKDNTNNNNYRERDESLRYLRYLSSMASMTHNCSNNNNNSNIINNTT 101

Query: 274 HTPGPRG----------DAVFHHQHNPHQANAKASSFPQHQSSPQNMAVMGKDESQSQPC 125
            + G RG          +  +  +    Q   KAS F Q QSSP  +      +  SQPC
Sbjct: 102 TSCGKRGFLETVERNTGEEGYQVKTQQQQQQTKAS-FLQFQSSPPVIT-----KESSQPC 155

Query: 124 C---VDLQDAEKNAFSPSSA---LPNRSHKRSAPGPVVGWPPIRSIR 2
           C   VDLQ+ EK AFSP+SA   +PN S KRSAP  VVGWPPIRS R
Sbjct: 156 CTKVVDLQNTEKKAFSPASANTAVPNSSQKRSAPTAVVGWPPIRSFR 202


Top