BLASTX nr result

ID: Glycyrrhiza23_contig00025586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025586
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588753.1| Pentatricopeptide repeat-containing protein ...   148   4e-34
ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31
ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25

>ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477801|gb|AES59004.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 600

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/77 (92%), Positives = 76/77 (98%)
 Frame = +1

Query: 1   LGESISKELIRTEPMHESNYVLLSNIYAKLRRWEKKTKVREMMDMRGMKKVPGSTMIELK 180
           LGESISKELI++EPMHESNYVLLSNIYAKLR+WEKKTKVREMMDMRGMKKVPGSTMIE+ 
Sbjct: 415 LGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREMMDMRGMKKVPGSTMIEVN 474

Query: 181 NEMHEFVAGDKSHDQYK 231
           NEM+EFVAGDKSHDQYK
Sbjct: 475 NEMYEFVAGDKSHDQYK 491


>ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 705

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/77 (83%), Positives = 73/77 (94%)
 Frame = +1

Query: 1   LGESISKELIRTEPMHESNYVLLSNIYAKLRRWEKKTKVREMMDMRGMKKVPGSTMIELK 180
           LGES++KELIR EP HESNYVLLSNIYAKL RWEKKTKVREMMD++GM+K+PGSTMIE+ 
Sbjct: 520 LGESVAKELIRREPSHESNYVLLSNIYAKLLRWEKKTKVREMMDVKGMRKIPGSTMIEMN 579

Query: 181 NEMHEFVAGDKSHDQYK 231
           NE++EFVAGDKSHDQYK
Sbjct: 580 NEIYEFVAGDKSHDQYK 596


>ref|XP_002308660.1| predicted protein [Populus trichocarpa] gi|222854636|gb|EEE92183.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/77 (76%), Positives = 69/77 (89%)
 Frame = +1

Query: 1   LGESISKELIRTEPMHESNYVLLSNIYAKLRRWEKKTKVREMMDMRGMKKVPGSTMIELK 180
           LGE I+++LIR EPMHESNYVLLSNIYAK+  WEKKT++RE MDM+GMKK+PGSTMIEL 
Sbjct: 302 LGEKITRQLIRNEPMHESNYVLLSNIYAKMSDWEKKTRIREAMDMKGMKKIPGSTMIELD 361

Query: 181 NEMHEFVAGDKSHDQYK 231
           NE++EFVAGDKSH Q K
Sbjct: 362 NEIYEFVAGDKSHAQSK 378


>ref|XP_004138859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
           gi|449529652|ref|XP_004171812.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 606

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/77 (72%), Positives = 69/77 (89%)
 Frame = +1

Query: 1   LGESISKELIRTEPMHESNYVLLSNIYAKLRRWEKKTKVREMMDMRGMKKVPGSTMIELK 180
           LGE I+K L++ EP+HESNYVLLSNIYAK   WEKKTK+RE+M+++GMKKVPGSTMIE+ 
Sbjct: 421 LGEKITKLLMKHEPLHESNYVLLSNIYAKTLSWEKKTKIREVMEVKGMKKVPGSTMIEID 480

Query: 181 NEMHEFVAGDKSHDQYK 231
           NE++EFVAGDKSH Q+K
Sbjct: 481 NEIYEFVAGDKSHKQHK 497


>ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
           gi|296082021|emb|CBI21026.3| unnamed protein product
           [Vitis vinifera]
          Length = 583

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/76 (72%), Positives = 66/76 (86%)
 Frame = +1

Query: 1   LGESISKELIRTEPMHESNYVLLSNIYAKLRRWEKKTKVREMMDMRGMKKVPGSTMIELK 180
           LGESISK+LIR EPMHESNYVLLSNIY K+  WEKK+K+R  M  +G++KVPGSTMIEL 
Sbjct: 398 LGESISKQLIRNEPMHESNYVLLSNIYGKMLDWEKKSKIRVAMGKKGIQKVPGSTMIELD 457

Query: 181 NEMHEFVAGDKSHDQY 228
           NE+HEF+ GD+SH+QY
Sbjct: 458 NEIHEFIVGDRSHNQY 473


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