BLASTX nr result

ID: Glycyrrhiza23_contig00025541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025541
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-...   240   8e-62
ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-...   234   5e-60
ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|...   218   4e-55
ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-...   217   7e-55
emb|CBI38730.3| unnamed protein product [Vitis vinifera]              207   9e-52

>ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1942

 Score =  240 bits (613), Expect = 8e-62
 Identities = 124/144 (86%), Positives = 127/144 (88%)
 Frame = +3

Query: 3   DVNVRDREQRGYWERDRSGCNGMVFRLGTWEADRTREEKMANDAKQESNGKLDKKSEEAK 182
           D + RDRE RGYWERD+SG   MVFR G WE D  RE+KMA D K E NG LDKKSEEAK
Sbjct: 219 DRDWRDRETRGYWERDKSGSTDMVFRTGAWEPDCNREDKMAIDMKLEKNGNLDKKSEEAK 278

Query: 183 ERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLQKQNKKMLAVF 362
           ERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESL KQNKKMLAVF
Sbjct: 279 ERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLHKQNKKMLAVF 338

Query: 363 LVPKVPLVYQQAEVIRERTGYQVG 434
           LVPKVPLVYQQAEVIRERTGYQVG
Sbjct: 339 LVPKVPLVYQQAEVIRERTGYQVG 362


>ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
          Length = 1944

 Score =  234 bits (597), Expect = 5e-60
 Identities = 118/144 (81%), Positives = 127/144 (88%)
 Frame = +3

Query: 3   DVNVRDREQRGYWERDRSGCNGMVFRLGTWEADRTREEKMANDAKQESNGKLDKKSEEAK 182
           D + RDRE RGYWERD+SG   M+FR G WE D  R++KM  D K E+ GKLDKKSE+A 
Sbjct: 221 DRDCRDRETRGYWERDKSGSTDMIFRTGAWEPDHNRDDKMVIDTKLENYGKLDKKSEDAI 280

Query: 183 ERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLQKQNKKMLAVF 362
           ERVPEEKARQYQLDVLEQ+KRKNTIAFLETGAGKTLIAVLLIKSIQ+SLQKQNKKMLAVF
Sbjct: 281 ERVPEEKARQYQLDVLEQSKRKNTIAFLETGAGKTLIAVLLIKSIQDSLQKQNKKMLAVF 340

Query: 363 LVPKVPLVYQQAEVIRERTGYQVG 434
           LVPKVPLVYQQAEVIRERTGYQVG
Sbjct: 341 LVPKVPLVYQQAEVIRERTGYQVG 364


>ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
           gi|222844405|gb|EEE81952.1| dicer-like protein [Populus
           trichocarpa]
          Length = 1817

 Score =  218 bits (555), Expect = 4e-55
 Identities = 112/144 (77%), Positives = 126/144 (87%)
 Frame = +3

Query: 3   DVNVRDREQRGYWERDRSGCNGMVFRLGTWEADRTREEKMANDAKQESNGKLDKKSEEAK 182
           D + R+RE RGYWERDRSG   MVFRLGTWEAD  +E + AND  QE  G+L+KKSEE+K
Sbjct: 221 DRDWRERELRGYWERDRSGSKDMVFRLGTWEADHNKEGREANDKIQECKGELEKKSEESK 280

Query: 183 ERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLQKQNKKMLAVF 362
           E+VPEE+ARQYQLDVL+QAK+KNTIAFLETGAGKTLIAVLLI+SI   LQ+QNKK+LAVF
Sbjct: 281 EKVPEEQARQYQLDVLDQAKKKNTIAFLETGAGKTLIAVLLIRSICNDLQRQNKKILAVF 340

Query: 363 LVPKVPLVYQQAEVIRERTGYQVG 434
           LVPKVPLVYQQAEVIRER GYQVG
Sbjct: 341 LVPKVPLVYQQAEVIRER-GYQVG 363


>ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
          Length = 1986

 Score =  217 bits (553), Expect = 7e-55
 Identities = 109/144 (75%), Positives = 120/144 (83%)
 Frame = +3

Query: 3   DVNVRDREQRGYWERDRSGCNGMVFRLGTWEADRTREEKMANDAKQESNGKLDKKSEEAK 182
           D ++R+REQ+GYWERD+SG N MVF  G WEADR R+    ND   E  G  DK S+E K
Sbjct: 260 DRDLREREQKGYWERDKSGSNDMVFHSGMWEADRNRDAMTDNDKNLEFQGTADKSSKEIK 319

Query: 183 ERVPEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLQKQNKKMLAVF 362
           E++PEE+ARQYQLDVLEQAK+KNTIAFLETGAGKTLIAVLLIKSI   LQ QNKKMLAVF
Sbjct: 320 EKIPEEQARQYQLDVLEQAKKKNTIAFLETGAGKTLIAVLLIKSIYNDLQTQNKKMLAVF 379

Query: 363 LVPKVPLVYQQAEVIRERTGYQVG 434
           LVPKVPLVYQQAEVIRERTGYQVG
Sbjct: 380 LVPKVPLVYQQAEVIRERTGYQVG 403


>emb|CBI38730.3| unnamed protein product [Vitis vinifera]
          Length = 1474

 Score =  207 bits (526), Expect = 9e-52
 Identities = 103/141 (73%), Positives = 120/141 (85%), Gaps = 1/141 (0%)
 Frame = +3

Query: 15  RDREQRGYWERDRSGCNGMVFRLGTWEADRTREEKMANDAKQESNGKL-DKKSEEAKERV 191
           RDRE +GYWERDR G   M+F LG+WEA+R RE KM  +  QE NG + +++ EE KE++
Sbjct: 189 RDREAKGYWERDRLGSKEMIFHLGSWEAERNREGKMGAEKNQECNGSVTERRLEEPKEKL 248

Query: 192 PEEKARQYQLDVLEQAKRKNTIAFLETGAGKTLIAVLLIKSIQESLQKQNKKMLAVFLVP 371
           PEE+ARQYQLDVLEQAK++NTIAFLETGAGKTLIAVLLI+S+   LQ QNKK+LAVFLVP
Sbjct: 249 PEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIRSVFNDLQGQNKKLLAVFLVP 308

Query: 372 KVPLVYQQAEVIRERTGYQVG 434
           KVPLVYQQAEVIRERTGYQVG
Sbjct: 309 KVPLVYQQAEVIRERTGYQVG 329


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