BLASTX nr result

ID: Glycyrrhiza23_contig00025535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025535
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    64   1e-08
gb|AFK40613.1| unknown [Medicago truncatula]                           57   1e-06
ref|XP_003612607.1| Replication protein A1-like protein [Medicag...    57   1e-06
ref|XP_003612606.1| Replication protein A1-like protein [Medicag...    57   1e-06

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = +3

Query: 243 MALNLTQGAIITMCDQNFSSEDLKPVLQVIDLKLVQSQQHRATD 374
           MA+NLTQGAI+TMC   F+SEDL PVLQVIDLKLVQSQQ+  T+
Sbjct: 1   MAVNLTQGAIVTMC---FTSEDLHPVLQVIDLKLVQSQQNSGTE 41


>gb|AFK40613.1| unknown [Medicago truncatula]
          Length = 341

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +3

Query: 243 MALNLTQGAIITMCDQNFSSEDLKPVLQVIDLKLVQSQQHRAT 371
           MA+NLTQGAI+ MC   F+SE+++PVLQVIDLKL+QSQQ+  T
Sbjct: 146 MAVNLTQGAIMKMC---FTSEEIQPVLQVIDLKLLQSQQNSTT 185



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 243 MALNLTQGAIITMCDQNFSSEDLKPVLQVIDLKLVQSQQHRATD 374
           MA+NLTQGAI+ MC   F+SE+L PVLQ IDLK VQSQQ+ A +
Sbjct: 1   MAVNLTQGAIVKMC---FTSEELHPVLQFIDLKPVQSQQNSAIE 41


>ref|XP_003612607.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513942|gb|AES95565.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 147

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = +3

Query: 243 MALNLTQGAIITMCDQNFSSEDLKPVLQVIDLKLVQSQQHRATD 374
           MA+NLTQGAIITMC   F+SE  +PVLQV D+KLVQSQQ+  T+
Sbjct: 14  MAVNLTQGAIITMC---FTSEVWEPVLQVFDMKLVQSQQNNTTE 54


>ref|XP_003612606.1| Replication protein A1-like protein [Medicago truncatula]
           gi|355513941|gb|AES95564.1| Replication protein A1-like
           protein [Medicago truncatula]
          Length = 708

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = +3

Query: 243 MALNLTQGAIITMCDQNFSSEDLKPVLQVIDLKLVQSQQHRAT 371
           MA+NLTQGAI+ MC   F+SE+++PVLQVIDLKL+QSQQ+  T
Sbjct: 513 MAVNLTQGAIMKMC---FTSEEIQPVLQVIDLKLLQSQQNSTT 552



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 29/44 (65%), Positives = 35/44 (79%)
 Frame = +3

Query: 243 MALNLTQGAIITMCDQNFSSEDLKPVLQVIDLKLVQSQQHRATD 374
           MA+NLTQGAI+ MC   F+SE+L PVLQ IDLK VQSQQ+ A +
Sbjct: 368 MAVNLTQGAIVKMC---FTSEELHPVLQFIDLKPVQSQQNSAIE 408


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