BLASTX nr result

ID: Glycyrrhiza23_contig00025528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025528
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
ref|XP_003610936.1| Pentatricopeptide repeat-containing protein ...   147   1e-33
ref|XP_002528032.1| pentatricopeptide repeat-containing protein,...   131   7e-29
ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|2...   128   6e-28
emb|CBI31329.3| unnamed protein product [Vitis vinifera]              124   1e-26

>ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  155 bits (393), Expect = 2e-36
 Identities = 74/99 (74%), Positives = 86/99 (86%)
 Frame = -1

Query: 299 LLLACSNLRSLPQGKQLHAHVIQLGMDQNPILVSRLINFYASVNLLDDAQTVTENSNSLD 120
           LLLAC++ +SL QGKQLHA VI LG+DQNPILVSRL+NFY +VNLL DAQ VTE+SN+LD
Sbjct: 87  LLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLD 146

Query: 119 PLHWNMLISFYVRNGLFGEALSVYKKMLRKKVEPDDFTY 3
           PLHWN+LIS YVRNG F EAL VYK ML KK+EPD++TY
Sbjct: 147 PLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTY 185


>ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512271|gb|AES93894.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 812

 Score =  147 bits (370), Expect = 1e-33
 Identities = 70/99 (70%), Positives = 84/99 (84%)
 Frame = -1

Query: 299 LLLACSNLRSLPQGKQLHAHVIQLGMDQNPILVSRLINFYASVNLLDDAQTVTENSNSLD 120
           LLL C+NL+SL QGKQ+HAH+I LG+ QNPILVS+LINFYASV+LL DAQ V E SNS D
Sbjct: 98  LLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFD 157

Query: 119 PLHWNMLISFYVRNGLFGEALSVYKKMLRKKVEPDDFTY 3
           PLHWNM+IS YV+N LF +A+SVY++ML K V PDD+TY
Sbjct: 158 PLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTY 196


>ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532562|gb|EEF34350.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 730

 Score =  131 bits (329), Expect = 7e-29
 Identities = 62/99 (62%), Positives = 76/99 (76%)
 Frame = -1

Query: 299 LLLACSNLRSLPQGKQLHAHVIQLGMDQNPILVSRLINFYASVNLLDDAQTVTENSNSLD 120
           LLL+C NL+SL QGKQLH  +I LG +Q+PI+V +L+ FY + +LL DA T+TENSN L 
Sbjct: 99  LLLSCVNLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILH 158

Query: 119 PLHWNMLISFYVRNGLFGEALSVYKKMLRKKVEPDDFTY 3
           PL WN+LIS YVRNGL GEALS YK+M  K + PD FTY
Sbjct: 159 PLPWNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTY 197


>ref|XP_002325515.1| predicted protein [Populus trichocarpa] gi|222862390|gb|EEE99896.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score =  128 bits (321), Expect = 6e-28
 Identities = 59/99 (59%), Positives = 78/99 (78%)
 Frame = -1

Query: 299 LLLACSNLRSLPQGKQLHAHVIQLGMDQNPILVSRLINFYASVNLLDDAQTVTENSNSLD 120
           LL +C+NL+SLPQGKQLHAH I LG + + +LV +L+ FY+S +LL DA T+T NS+ ++
Sbjct: 47  LLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVN 106

Query: 119 PLHWNMLISFYVRNGLFGEALSVYKKMLRKKVEPDDFTY 3
           PL WN+LIS YV NGL GEALS Y++M+ K V PD+FTY
Sbjct: 107 PLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTY 145


>emb|CBI31329.3| unnamed protein product [Vitis vinifera]
          Length = 753

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/99 (55%), Positives = 77/99 (77%)
 Frame = -1

Query: 299 LLLACSNLRSLPQGKQLHAHVIQLGMDQNPILVSRLINFYASVNLLDDAQTVTENSNSLD 120
           LL +C++++SL +G+QLH H+I LG +Q+PILV +L+ FY++ NLL DA  +TENSN L 
Sbjct: 106 LLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILH 165

Query: 119 PLHWNMLISFYVRNGLFGEALSVYKKMLRKKVEPDDFTY 3
           P  WN+LIS YVRNG   +ALS YK+M++K + PD+FTY
Sbjct: 166 PFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTY 204


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