BLASTX nr result

ID: Glycyrrhiza23_contig00025491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025491
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-...   175   3e-42
gb|ACU23800.1| unknown [Glycine max]                                  175   3e-42
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   109   3e-22
ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]...   108   5e-22
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   103   2e-20

>ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 756

 Score =  175 bits (444), Expect = 3e-42
 Identities = 92/144 (63%), Positives = 108/144 (75%), Gaps = 9/144 (6%)
 Frame = +2

Query: 2   RGNLSVNLTHVDTIRLSPHEVEECRRFQTTLFRILLRGEVNKLPSVSDEFCLRDNNPEID 181
           RG L VNL H++ I+LSP +V+ CRRFQTTLFRILL  +V KL SVSD+F L D NPEID
Sbjct: 73  RGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVSDDFSLGD-NPEID 131

Query: 182 YLLLPATVKNQRPSNSIIDWKSISSVP------CECKDDDARVWTKSGLVCSCKLKNCVV 343
           +LLLPATVK+QRPSNSIIDWK + SVP      C+CKD    V  ++  VCSCKL+NCVV
Sbjct: 132 FLLLPATVKHQRPSNSIIDWKPVLSVPFSSESTCDCKDHACNVRIRNDSVCSCKLENCVV 191

Query: 344 STPHNGLIYII---NGVMELNGNS 406
            TPHNG IYII   +G  +LNGNS
Sbjct: 192 YTPHNGSIYIIYTTDGTKKLNGNS 215


>gb|ACU23800.1| unknown [Glycine max]
          Length = 273

 Score =  175 bits (444), Expect = 3e-42
 Identities = 92/144 (63%), Positives = 108/144 (75%), Gaps = 9/144 (6%)
 Frame = +2

Query: 2   RGNLSVNLTHVDTIRLSPHEVEECRRFQTTLFRILLRGEVNKLPSVSDEFCLRDNNPEID 181
           RG L VNL H++ I+LSP +V+ CRRFQTTLFRILL  +V KL SVSD+F L D NPEID
Sbjct: 73  RGKLLVNLRHLEPIQLSPEKVQSCRRFQTTLFRILLNRDVTKLTSVSDDFSLGD-NPEID 131

Query: 182 YLLLPATVKNQRPSNSIIDWKSISSVP------CECKDDDARVWTKSGLVCSCKLKNCVV 343
           +LLLPATVK+QRPSNSIIDWK + SVP      C+CKD    V  ++  VCSCKL+NCVV
Sbjct: 132 FLLLPATVKHQRPSNSIIDWKPVLSVPFSSESTCDCKDHACNVRIRNDSVCSCKLENCVV 191

Query: 344 STPHNGLIYII---NGVMELNGNS 406
            TPHNG IYII   +G  +LNGNS
Sbjct: 192 YTPHNGSIYIIYTTDGTKKLNGNS 215


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  109 bits (272), Expect = 3e-22
 Identities = 68/141 (48%), Positives = 92/141 (65%), Gaps = 6/141 (4%)
 Frame = +2

Query: 2    RGNLSVNLTHVDTIRLSPHEVEECRRFQTTLFRILLRGEVNKLPSVSDEFCLRDNNPEID 181
            RG+LSVN  +  TI LSP +V  C++FQ T+ RIL+  ++NKL +  D  C  +++ EID
Sbjct: 721  RGSLSVNFRYKGTINLSPDQVLLCKKFQVTILRILIDHDMNKLTAGLDR-CYLEDDLEID 779

Query: 182  YLLLPATVKNQRPSNSIIDWKSISSV-PCE--CKDDDARVWTKSGLVCSCKLKNCVVSTP 352
            YLLLPA  K +  +   I+W +++SV P E  CK  +  + TKSGLVCSCKL+N +V T 
Sbjct: 780  YLLLPAMGKGKYTA---INWLAVNSVNPSEVSCKYHEPHIRTKSGLVCSCKLQNALVCTS 836

Query: 353  HN-GLI--YIINGVMELNGNS 406
            H  G I  YI  G MEL+GNS
Sbjct: 837  HPIGKISFYIATGTMELDGNS 857


>ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
            gi|355483599|gb|AES64802.1| Endoribonuclease Dicer
            [Medicago truncatula]
          Length = 1418

 Score =  108 bits (270), Expect = 5e-22
 Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
 Frame = +2

Query: 2    RGNLSVNLTHVDTIRLSPHEVEECRRFQTTLFRILLRGEVNKLPSVSDEFCLRDNNPEID 181
            RG+L+VNL +   I LSP +V  C+RFQ ++  IL+  +++K  S S+++ L D+  EID
Sbjct: 756  RGSLAVNLRYRGNINLSPDQVLLCKRFQVSILGILMNSKMDK-ESFSEKYSLEDDL-EID 813

Query: 182  YLLLPATVKNQRPSNSIIDWKSISSV---PCECKDDDARVWTKSGLVCSCKLKNCVVSTP 352
            YLLLP+    + PS   +DW +ISS+     +C+   A + T+ G  C C L+N ++ TP
Sbjct: 814  YLLLPSIAIEETPS---VDWLTISSIHPSKIQCRYHAANILTEKGFACGCILRNALICTP 870

Query: 353  HNGLIYIINGVMELNGNS 406
            HNG  YI  G+MEL+GNS
Sbjct: 871  HNGRTYITAGMMELDGNS 888


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
 Frame = +2

Query: 2    RGNLSVNLTHVDTIRLSPHEVEECRRFQTTLFRILLRGEVNKLPSVSDEFCLRDNNPEID 181
            RG++S+ L +  TI LSP+ V  C++FQ TL   ++   +NKL +  D+ C  ++N EID
Sbjct: 754  RGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDK-CYLEDNVEID 812

Query: 182  YLLLPATVKNQRPSNSIIDWKSISSVPCECKDDDARVWTKSGLVCSCKLKNCVVSTPHNG 361
            YLLLPA  K ++   + +  KS+      CK     + TKSGLVC+CKL++ +V T H G
Sbjct: 813  YLLLPAIGKGEKSHVNWLAIKSVEPSSFTCKYHQPHIETKSGLVCTCKLQDALVCTSHPG 872

Query: 362  ---LIYIINGVMELNGNS 406
                 YI  G+MEL+GNS
Sbjct: 873  GKIYFYITTGIMELHGNS 890


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