BLASTX nr result

ID: Glycyrrhiza23_contig00025478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025478
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865...   129   2e-28
ref|NP_001241249.1| uncharacterized protein LOC100781497 [Glycin...   125   4e-27
gb|AFK41682.1| unknown [Medicago truncatula]                          121   7e-26
ref|XP_003625833.1| hypothetical protein MTR_7g104720 [Medicago ...   121   7e-26
ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Popu...   117   1e-24

>ref|XP_003554438.1| PREDICTED: uncharacterized protein At5g39865-like [Glycine max]
          Length = 398

 Score =  129 bits (325), Expect = 2e-28
 Identities = 62/97 (63%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
 Frame = +2

Query: 2   RKLMGEKQVQVPVVFVKGRXXXXXXXXXXXXXXXXXXXXXXXIPGE-LGECKGCGGVRFV 178
           RKLMG +QV+VPVVFVKGR                       IP + LGEC+GCGGVRFV
Sbjct: 302 RKLMGTEQVKVPVVFVKGRFVGGAEEVVKLEEEGKLGVLFEGIPPKALGECEGCGGVRFV 361

Query: 179 MCVECNGSCKVLDEEQKKTVRCGQCNENGIIQCPICR 289
           MCVECNGSCKVLDE++KKT+RCGQCNENG+IQCP+CR
Sbjct: 362 MCVECNGSCKVLDEDRKKTLRCGQCNENGLIQCPMCR 398


>ref|NP_001241249.1| uncharacterized protein LOC100781497 [Glycine max]
           gi|255637067|gb|ACU18865.1| unknown [Glycine max]
          Length = 398

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/98 (64%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
 Frame = +2

Query: 2   RKLMGEKQVQVPVVFVKGRXXXXXXXXXXXXXXXXXXXXXXXIPGE-LGECKGCGGVRFV 178
           RKLMG KQV+VPVVFVKGR                       IP + LGEC+GCGGVRFV
Sbjct: 301 RKLMGTKQVKVPVVFVKGRLVGGAEEIVKLEEEGKLGVLFEGIPHKALGECEGCGGVRFV 360

Query: 179 MCVECNGSCKVLD-EEQKKTVRCGQCNENGIIQCPICR 289
           MCVECNGSCKVLD E  KKT+RCGQCNENG+IQCP+CR
Sbjct: 361 MCVECNGSCKVLDHENHKKTLRCGQCNENGLIQCPMCR 398


>gb|AFK41682.1| unknown [Medicago truncatula]
          Length = 405

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/95 (61%), Positives = 64/95 (67%)
 Frame = +2

Query: 2   RKLMGEKQVQVPVVFVKGRXXXXXXXXXXXXXXXXXXXXXXXIPGELGECKGCGGVRFVM 181
           RKLMG KQVQVPVVFVKGR                       IP  LG C+GCG +RFVM
Sbjct: 310 RKLMGMKQVQVPVVFVKGRFVGGVDEIMKLEDEEKLGVLLEGIPRALGVCEGCGSLRFVM 369

Query: 182 CVECNGSCKVLDEEQKKTVRCGQCNENGIIQCPIC 286
           C ECNGSCKVLDE+QKKTV+CG CNENGII+C +C
Sbjct: 370 CKECNGSCKVLDEKQKKTVKCGYCNENGIIRCSLC 404


>ref|XP_003625833.1| hypothetical protein MTR_7g104720 [Medicago truncatula]
           gi|355500848|gb|AES82051.1| hypothetical protein
           MTR_7g104720 [Medicago truncatula]
          Length = 405

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/95 (61%), Positives = 64/95 (67%)
 Frame = +2

Query: 2   RKLMGEKQVQVPVVFVKGRXXXXXXXXXXXXXXXXXXXXXXXIPGELGECKGCGGVRFVM 181
           RKLMG KQVQVPVVFVKGR                       IP  LG C+GCG +RFVM
Sbjct: 310 RKLMGMKQVQVPVVFVKGRFVGGVDEIMKLEDEEKLGVLLEGIPRALGVCEGCGSLRFVM 369

Query: 182 CVECNGSCKVLDEEQKKTVRCGQCNENGIIQCPIC 286
           C ECNGSCKVLDE+QKKTV+CG CNENGII+C +C
Sbjct: 370 CKECNGSCKVLDEKQKKTVKCGYCNENGIIRCSLC 404


>ref|XP_002309426.1| hypothetical protein POPTRDRAFT_561500 [Populus trichocarpa]
           gi|222855402|gb|EEE92949.1| hypothetical protein
           POPTRDRAFT_561500 [Populus trichocarpa]
          Length = 407

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/96 (58%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   RKLMGEKQVQVPVVFVKGRXXXXXXXXXXXXXXXXXXXXXXXIP-GELGECKGCGGVRFV 178
           R+LMG K+V+VP+VFVKGR                       IP G  G C+GC GVRF+
Sbjct: 311 RRLMGTKEVKVPLVFVKGRLIGGADQVVKLEEEGKLEILFDGIPRGLAGGCEGCAGVRFM 370

Query: 179 MCVECNGSCKVLDEEQKKTVRCGQCNENGIIQCPIC 286
           MCV+CNGSCKVLDE QKK VRCG+CNENG+IQCPIC
Sbjct: 371 MCVQCNGSCKVLDEMQKKMVRCGECNENGLIQCPIC 406


Top