BLASTX nr result

ID: Glycyrrhiza23_contig00025450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025450
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637626.1| Pentatricopeptide repeat-containing protein ...   135   4e-30
ref|XP_003637381.1| Pentatricopeptide repeat-containing protein ...   135   4e-30
ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_002524030.1| pentatricopeptide repeat-containing protein,...    84   1e-14
ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13

>ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503561|gb|AES84764.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  135 bits (340), Expect = 4e-30
 Identities = 65/95 (68%), Positives = 82/95 (86%)
 Frame = -1

Query: 286 RVGDLSSAESLFNEILGFQKDKESSQLENHAVVTRTEMRNLRPTLATYTTLISAYCKHRG 107
           + GDL+ AESLFNEILGF KD++  +L+N+ VVT+ E++NL+PTL TYTTLI+AYCK  G
Sbjct: 279 KTGDLTRAESLFNEILGFWKDED--RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVG 336

Query: 106 IEESLSLYEQMIINGIMPDVVACSSILYGLCKHGK 2
           +EES SLY++MI+NGIMPDVV CSSILYG C+HGK
Sbjct: 337 VEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371


>ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503316|gb|AES84519.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  135 bits (340), Expect = 4e-30
 Identities = 65/95 (68%), Positives = 82/95 (86%)
 Frame = -1

Query: 286 RVGDLSSAESLFNEILGFQKDKESSQLENHAVVTRTEMRNLRPTLATYTTLISAYCKHRG 107
           + GDL+ AESLFNEILGF KD++  +L+N+ VVT+ E++NL+PTL TYTTLI+AYCK  G
Sbjct: 279 KTGDLTRAESLFNEILGFWKDED--RLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVG 336

Query: 106 IEESLSLYEQMIINGIMPDVVACSSILYGLCKHGK 2
           +EES SLY++MI+NGIMPDVV CSSILYG C+HGK
Sbjct: 337 VEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGK 371


>ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  129 bits (324), Expect = 3e-28
 Identities = 60/93 (64%), Positives = 77/93 (82%)
 Frame = -1

Query: 280 GDLSSAESLFNEILGFQKDKESSQLENHAVVTRTEMRNLRPTLATYTTLISAYCKHRGIE 101
           GDL+ AES+ NEILGF++D ES  L +  V T   +R+L+PT+ T+TTLI+AYCKHRGI+
Sbjct: 194 GDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGID 253

Query: 100 ESLSLYEQMIINGIMPDVVACSSILYGLCKHGK 2
           +  SLYEQMI++G+MPDVV CSSILYGLC+HGK
Sbjct: 254 DFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGK 286


>ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536757|gb|EEF38398.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1016

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/93 (46%), Positives = 59/93 (63%)
 Frame = -1

Query: 280 GDLSSAESLFNEILGFQKDKESSQLENHAVVTRTEMRNLRPTLATYTTLISAYCKHRGIE 101
           G+   A+SL +EI   +  K+S        + + +  NL   L TYTT+IS YCK  G+E
Sbjct: 196 GEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLE 255

Query: 100 ESLSLYEQMIINGIMPDVVACSSILYGLCKHGK 2
           E+ +LYE+MIING +PDVV  SSI+ GLCK G+
Sbjct: 256 EARALYEEMIINGFLPDVVTYSSIVNGLCKDGR 288


>ref|XP_002325452.1| predicted protein [Populus trichocarpa] gi|222862327|gb|EEE99833.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/55 (67%), Positives = 43/55 (78%)
 Frame = -1

Query: 169 NLRPTLATYTTLISAYCKHRGIEESLSLYEQMIINGIMPDVVACSSILYGLCKHG 5
           NL P L TYTTLISAYCK  G+ E+LSLYE+MI +G +PDVV  SSI+ GLCK G
Sbjct: 151 NLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRG 205


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