BLASTX nr result

ID: Glycyrrhiza23_contig00025425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025425
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   118   4e-25
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...   117   1e-24
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   115   5e-24
ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, ...   112   3e-23
ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [...   112   3e-23

>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/62 (90%), Positives = 58/62 (93%)
 Frame = -3

Query: 442 PGISFTDSGRVLGEKWKKMSAEEKEPYEAKARADKKRYQDEISGYQNTQPMNIDSGNESD 263
           PGISFTD GRVLGEKWKK+SAEEKEPYEAKAR DKKRY DEISGY+N QPMNIDSGNESD
Sbjct: 553 PGISFTDVGRVLGEKWKKLSAEEKEPYEAKAREDKKRYMDEISGYKNPQPMNIDSGNESD 612

Query: 262 SA 257
           SA
Sbjct: 613 SA 614


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/62 (87%), Positives = 59/62 (95%)
 Frame = -3

Query: 442 PGISFTDSGRVLGEKWKKMSAEEKEPYEAKARADKKRYQDEISGYQNTQPMNIDSGNESD 263
           PGISFTD GRVLGEKWK +SAEEKEPYEAKA+ADKKRY+DEISGY+N QPMN+DSGNESD
Sbjct: 581 PGISFTDVGRVLGEKWKNLSAEEKEPYEAKAQADKKRYKDEISGYKNPQPMNVDSGNESD 640

Query: 262 SA 257
           SA
Sbjct: 641 SA 642


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/62 (87%), Positives = 57/62 (91%)
 Frame = -3

Query: 442 PGISFTDSGRVLGEKWKKMSAEEKEPYEAKARADKKRYQDEISGYQNTQPMNIDSGNESD 263
           PGISFTD  RVLGEKWKK+S EEKEPYEAKAR DKKRY+DEISGY+N QPMNIDSGNESD
Sbjct: 579 PGISFTDVSRVLGEKWKKLSVEEKEPYEAKAREDKKRYKDEISGYKNPQPMNIDSGNESD 638

Query: 262 SA 257
           SA
Sbjct: 639 SA 640


>ref|XP_004163534.1| PREDICTED: FACT complex subunit SSRP1-like, partial [Cucumis
           sativus]
          Length = 303

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -3

Query: 442 PGISFTDSGRVLGEKWKKMSAEEKEPYEAKARADKKRYQDEISGYQNTQPMNIDSGNESD 263
           PGISFT+ GRVLG+KW KMSAEEKEPYE+KAR DKKRY++EISGY+N QPMNIDSGNESD
Sbjct: 242 PGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESD 301

Query: 262 SA 257
           SA
Sbjct: 302 SA 303


>ref|XP_004147459.1| PREDICTED: FACT complex subunit SSRP1-like [Cucumis sativus]
          Length = 642

 Score =  112 bits (280), Expect = 3e-23
 Identities = 52/62 (83%), Positives = 58/62 (93%)
 Frame = -3

Query: 442 PGISFTDSGRVLGEKWKKMSAEEKEPYEAKARADKKRYQDEISGYQNTQPMNIDSGNESD 263
           PGISFT+ GRVLG+KW KMSAEEKEPYE+KAR DKKRY++EISGY+N QPMNIDSGNESD
Sbjct: 581 PGISFTELGRVLGDKWNKMSAEEKEPYESKARDDKKRYKEEISGYKNPQPMNIDSGNESD 640

Query: 262 SA 257
           SA
Sbjct: 641 SA 642


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