BLASTX nr result

ID: Glycyrrhiza23_contig00025401 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025401
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517441.1| PREDICTED: putative DNA-binding protein ESCA...   178   7e-43
ref|XP_003538721.1| PREDICTED: putative DNA-binding protein ESCA...   170   1e-40
ref|XP_003611214.1| AT-hook DNA-binding protein [Medicago trunca...   159   4e-37
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36

>ref|XP_003517441.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 300

 Score =  178 bits (451), Expect = 7e-43
 Identities = 98/152 (64%), Positives = 105/152 (69%)
 Frame = +3

Query: 141 MDPISSAHGHSLPPPFHTARDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSGGLNLAH 320
           MDPI+ AHGHSLPPPFH  RDL                            GSSGGLNLAH
Sbjct: 1   MDPIT-AHGHSLPPPFHAGRDLHLHQQQHQFHSLQEDEQS----------GSSGGLNLAH 49

Query: 321 KRELDEENNKFSGGHELLGTKEGLGGSAGESEMTRRPRGRPAGSKNKPKPPIIITRDSAN 500
           KRE +E NN  S        KEG G  +GE+E++RRPRGRPAGSKNKPKPPIIITRDSAN
Sbjct: 50  KREHEENNNNNSSDG-----KEGGGAGSGETEISRRPRGRPAGSKNKPKPPIIITRDSAN 104

Query: 501 ALKTHVMEVADGCDIVDSVTNFARRRQRGVCI 596
           ALKTHVMEVADGCDIVDSV+ FARRRQRGVCI
Sbjct: 105 ALKTHVMEVADGCDIVDSVSAFARRRQRGVCI 136


>ref|XP_003538721.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
          Length = 298

 Score =  170 bits (431), Expect = 1e-40
 Identities = 101/153 (66%), Positives = 108/153 (70%), Gaps = 1/153 (0%)
 Frame = +3

Query: 141 MDPISSAHGHSLPPPFHTARDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSGGLNLA- 317
           MDPI+ AHGHSLPPPFHTARDL                            GSSGGLNLA 
Sbjct: 1   MDPIT-AHGHSLPPPFHTARDLHLHHQQQQHQFHSLQEDEQS--------GSSGGLNLAA 51

Query: 318 HKRELDEENNKFSGGHELLGTKEGLGGSAGESEMTRRPRGRPAGSKNKPKPPIIITRDSA 497
           HKRE +E NN  S G      KEG  GSA E+E++RRPRGRPAGSKNKPKPPIIITRDSA
Sbjct: 52  HKREREENNN--SDG------KEGGAGSA-ETEISRRPRGRPAGSKNKPKPPIIITRDSA 102

Query: 498 NALKTHVMEVADGCDIVDSVTNFARRRQRGVCI 596
           NALKTHVMEVADGCDIV+SV+ FARRRQRGVCI
Sbjct: 103 NALKTHVMEVADGCDIVESVSAFARRRQRGVCI 135


>ref|XP_003611214.1| AT-hook DNA-binding protein [Medicago truncatula]
           gi|355512549|gb|AES94172.1| AT-hook DNA-binding protein
           [Medicago truncatula]
          Length = 325

 Score =  159 bits (401), Expect = 4e-37
 Identities = 93/161 (57%), Positives = 102/161 (63%), Gaps = 9/161 (5%)
 Frame = +3

Query: 141 MDPISSAHGHSLPPPFHTARDLXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------GS 296
           MD I+S HGHSLPPPFHTARDL                                     S
Sbjct: 1   MDQITS-HGHSLPPPFHTARDLHLHHQHQQQQQQQQHHQFHTLQQQQQTTDQDEQSGSSS 59

Query: 297 SGGLNLAHKRELDEENNKFSGGHELLGTKEGLGGSAGESE-MTRRPRGRPAGSKNKPKPP 473
            GGLNL ++ E    NNKFS        + G GGS G+++ MTRRPRGRPAGSKNKPKPP
Sbjct: 60  GGGLNLTNREE--NSNNKFSTDFSPK-LESGGGGSGGDTDSMTRRPRGRPAGSKNKPKPP 116

Query: 474 IIITRDSANALKTHVMEVADGCDIVDSVTNFARRRQRGVCI 596
           IIITRDSANALKTHVMEVADGCD+V+SV NFARRRQRGVCI
Sbjct: 117 IIITRDSANALKTHVMEVADGCDVVESVNNFARRRQRGVCI 157


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score =  157 bits (398), Expect = 1e-36
 Identities = 88/152 (57%), Positives = 98/152 (64%)
 Frame = +3

Query: 141 MDPISSAHGHSLPPPFHTARDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSGGLNLAH 320
           MDP++ AHGHSLPPPFHT RD                             GSS GLN + 
Sbjct: 1   MDPVT-AHGHSLPPPFHT-RDF--QLHHHQQQQQHQFHHQQQQNSEDEQSGSSSGLNKSL 56

Query: 321 KRELDEENNKFSGGHELLGTKEGLGGSAGESEMTRRPRGRPAGSKNKPKPPIIITRDSAN 500
           KRE DE NN           KE +   +GE E+TRRPRGRP+GSKNKPKPPIIITRDSAN
Sbjct: 57  KRERDENNNSMGNSE----GKELITSGSGEGEITRRPRGRPSGSKNKPKPPIIITRDSAN 112

Query: 501 ALKTHVMEVADGCDIVDSVTNFARRRQRGVCI 596
           AL+TH+MEVADGCDIV+SV  FARRRQRGVCI
Sbjct: 113 ALRTHLMEVADGCDIVESVATFARRRQRGVCI 144


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  156 bits (395), Expect = 2e-36
 Identities = 89/155 (57%), Positives = 100/155 (64%), Gaps = 3/155 (1%)
 Frame = +3

Query: 141 MDPISSAHGHSLPPPFHTARDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSGGLNLAH 320
           MDP++ AHGHSLPPPFHT RD                             GSS GLN + 
Sbjct: 1   MDPVT-AHGHSLPPPFHT-RDFQLHQQQQQQHQFHHQQQQNSEDEQS---GSSSGLNKSL 55

Query: 321 KRELDEENNKFSGGHELLGTKEG---LGGSAGESEMTRRPRGRPAGSKNKPKPPIIITRD 491
           KRE DE NN        +G +EG   +    G+ E+TRRPRGRPAGSKNKPKPPIIITRD
Sbjct: 56  KRERDESNNS-------MGNREGQELITSGDGDGEITRRPRGRPAGSKNKPKPPIIITRD 108

Query: 492 SANALKTHVMEVADGCDIVDSVTNFARRRQRGVCI 596
           SANAL+TH+MEVADGCDIV+SV  FARRRQRGVCI
Sbjct: 109 SANALRTHLMEVADGCDIVESVATFARRRQRGVCI 143


Top