BLASTX nr result

ID: Glycyrrhiza23_contig00025388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025388
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540931.1| PREDICTED: reticulon-like protein B17-like [...   139   3e-31
gb|AFK47382.1| unknown [Medicago truncatula]                          137   9e-31
ref|XP_003607499.1| Reticulon-like protein B18 [Medicago truncat...   137   9e-31
ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [...   135   4e-30
ref|XP_003541899.1| PREDICTED: reticulon-like protein B17-like [...   117   1e-24

>ref|XP_003540931.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 382

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/102 (67%), Positives = 74/102 (72%)
 Frame = +2

Query: 2   TDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNXXXXXXXXXXXXXXXXXXXXXNSVCQR 181
           TDLIMWKDVSKSTLWF FG LCFLS+CFTKG+N                     NSVCQR
Sbjct: 169 TDLIMWKDVSKSTLWFVFGCLCFLSSCFTKGVNFSIFSAISRLAILLLGVSFFSNSVCQR 228

Query: 182 DQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEP 307
           +Q E+R +AKLKEDDIL LAK ILPA NFAISKTRELFSGEP
Sbjct: 229 NQVEKRSFAKLKEDDILHLAKLILPALNFAISKTRELFSGEP 270


>gb|AFK47382.1| unknown [Medicago truncatula]
          Length = 364

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/102 (66%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   TDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNXXXXXXXXXXXXXXXXXXXXXNSVCQR 181
           T+LIMWKDV+KSTLWF FGSLCFLSTCFTKG+N                     NSVCQR
Sbjct: 156 TELIMWKDVTKSTLWFGFGSLCFLSTCFTKGINFSIFSAISQLAILILAVSFFSNSVCQR 215

Query: 182 DQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEP 307
            QA+ RGY KLK+DDILRLAK ILPA NFA SKT ELFSGEP
Sbjct: 216 GQAKGRGYVKLKDDDILRLAKLILPALNFAFSKTTELFSGEP 257


>ref|XP_003607499.1| Reticulon-like protein B18 [Medicago truncatula]
           gi|355508554|gb|AES89696.1| Reticulon-like protein B18
           [Medicago truncatula]
          Length = 390

 Score =  137 bits (345), Expect = 9e-31
 Identities = 68/102 (66%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   TDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNXXXXXXXXXXXXXXXXXXXXXNSVCQR 181
           T+LIMWKDV+KSTLWF FGSLCFLSTCFTKG+N                     NSVCQR
Sbjct: 139 TELIMWKDVTKSTLWFGFGSLCFLSTCFTKGINFSIFSAISQLAILILAVSFFSNSVCQR 198

Query: 182 DQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEP 307
            QA+ RGY KLK+DDILRLAK ILPA NFA SKT ELFSGEP
Sbjct: 199 GQAKGRGYVKLKDDDILRLAKLILPALNFAFSKTTELFSGEP 240


>ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 430

 Score =  135 bits (339), Expect = 4e-30
 Identities = 67/102 (65%), Positives = 73/102 (71%)
 Frame = +2

Query: 2   TDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNXXXXXXXXXXXXXXXXXXXXXNSVCQR 181
           +DLIMWKDVSKSTLWF  G LCFLS+CFTKG+N                     NSVCQR
Sbjct: 179 SDLIMWKDVSKSTLWFGLGCLCFLSSCFTKGVNFSIFSAISRLAILLLGVSFFSNSVCQR 238

Query: 182 DQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEP 307
           +Q E+R +AKLKEDDIL LAK ILPA NFAISKTRELFSGEP
Sbjct: 239 NQVEKRSFAKLKEDDILHLAKLILPALNFAISKTRELFSGEP 280


>ref|XP_003541899.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 385

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/102 (56%), Positives = 67/102 (65%)
 Frame = +2

Query: 2   TDLIMWKDVSKSTLWFAFGSLCFLSTCFTKGLNXXXXXXXXXXXXXXXXXXXXXNSVCQR 181
           +DLIMWKD SKST WF F SLC LS+CFT+GLN                     NS+CQR
Sbjct: 135 SDLIMWKDASKSTFWFGFCSLCLLSSCFTQGLNFSVFSALSQLGILLSGVSFFSNSICQR 194

Query: 182 DQAEQRGYAKLKEDDILRLAKFILPAFNFAISKTRELFSGEP 307
           ++ E++   KL EDDILRLAK ILPA NFAIS+ R LFSGEP
Sbjct: 195 NEVEEKREIKLTEDDILRLAKLILPALNFAISRMRALFSGEP 236


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