BLASTX nr result

ID: Glycyrrhiza23_contig00025380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025380
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606129.1| Bifunctional polymyxin resistance arnA prote...   452   e-125
ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance...   446   e-123
ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance...   445   e-123
emb|CAN62503.1| hypothetical protein VITISV_010651 [Vitis vinifera]   393   e-107
ref|XP_002274631.2| PREDICTED: bifunctional polymyxin resistance...   392   e-107

>ref|XP_003606129.1| Bifunctional polymyxin resistance arnA protein [Medicago
           truncatula] gi|355507184|gb|AES88326.1| Bifunctional
           polymyxin resistance arnA protein [Medicago truncatula]
          Length = 381

 Score =  452 bits (1163), Expect = e-125
 Identities = 216/236 (91%), Positives = 228/236 (96%)
 Frame = +2

Query: 2   FLPQEYRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR 181
           FLP+EYR++P+YY LKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR
Sbjct: 145 FLPEEYRKEPQYYKLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR 204

Query: 182 PYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQRTFLYIKDAIEA 361
           PYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGG SQRTFLYIKDAIEA
Sbjct: 205 PYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGHSQRTFLYIKDAIEA 264

Query: 362 VLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSLSTLDVSSMDFY 541
           V+LMIDNP+RANGHIFNVGNP+NE SVK+LAELMIKVYAKV+GVP SSLSTLDVSS  FY
Sbjct: 265 VMLMIDNPDRANGHIFNVGNPDNEVSVKQLAELMIKVYAKVAGVPESSLSTLDVSSEVFY 324

Query: 542 GKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIKKELSKPS 709
           GKGYDDSDRRIPDMTIIT+QLGWKP+T LD+LLD TLQYQHQTYSHAIKKELSKPS
Sbjct: 325 GKGYDDSDRRIPDMTIITKQLGWKPKTSLDDLLDSTLQYQHQTYSHAIKKELSKPS 380


>ref|XP_003540793.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
           [Glycine max]
          Length = 381

 Score =  446 bits (1147), Expect = e-123
 Identities = 213/237 (89%), Positives = 228/237 (96%)
 Frame = +2

Query: 2   FLPQEYRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR 181
           FLP+EYRQDPKY+MLKEDV+PCIFGPV KQRWSYACAKQMTDRLIYAEHAENGLKFTIVR
Sbjct: 145 FLPEEYRQDPKYFMLKEDVTPCIFGPVEKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR 204

Query: 182 PYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQRTFLYIKDAIEA 361
           PYNWIGPRMDFIPGVDGPSDGVPRVLACFSN+LLRGEPLKLVDGGRSQRTFLYIKDAI+A
Sbjct: 205 PYNWIGPRMDFIPGVDGPSDGVPRVLACFSNSLLRGEPLKLVDGGRSQRTFLYIKDAIDA 264

Query: 362 VLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSLSTLDVSSMDFY 541
           V LMIDNPERANG+IFNVGNP+NE SVKELAELMIK YAKVSG PASSLST+DVS+ DFY
Sbjct: 265 VALMIDNPERANGYIFNVGNPDNEVSVKELAELMIKAYAKVSGAPASSLSTVDVSAEDFY 324

Query: 542 GKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIKKELSKPSN 712
           GKGYDDSDRRIPDMTIIT+QL WKP+T L+ELLDVTLQYQH+TYS AI++ELSKPSN
Sbjct: 325 GKGYDDSDRRIPDMTIITKQLAWKPKTLLEELLDVTLQYQHKTYSRAIERELSKPSN 381


>ref|XP_003538124.1| PREDICTED: bifunctional polymyxin resistance protein ArnA-like
           [Glycine max]
          Length = 381

 Score =  445 bits (1145), Expect = e-123
 Identities = 213/237 (89%), Positives = 227/237 (95%)
 Frame = +2

Query: 2   FLPQEYRQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR 181
           FLP+EYRQDPKY+MLKEDV+PC FGPV KQRWSYACAKQMTDRLIYAEHAENGLKFTIVR
Sbjct: 145 FLPEEYRQDPKYFMLKEDVTPCTFGPVEKQRWSYACAKQMTDRLIYAEHAENGLKFTIVR 204

Query: 182 PYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQRTFLYIKDAIEA 361
           PYNWIGPRMDFIPGVDGP DGVPRVLACFSN+LLRGEPLKLV+GGRSQRTFLYIKDAI+A
Sbjct: 205 PYNWIGPRMDFIPGVDGPCDGVPRVLACFSNSLLRGEPLKLVEGGRSQRTFLYIKDAIDA 264

Query: 362 VLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSLSTLDVSSMDFY 541
           V LMIDNPERA+GHIFNVGNP+NE SVKELAELMIK YAKVSGVPASSLSTLDVS+ DFY
Sbjct: 265 VALMIDNPERADGHIFNVGNPDNEVSVKELAELMIKAYAKVSGVPASSLSTLDVSAEDFY 324

Query: 542 GKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIKKELSKPSN 712
           GKGYDDSDRRIPDMTIIT+QL WKP+TPLDELLDVTLQYQH+TYS AI++ELSK SN
Sbjct: 325 GKGYDDSDRRIPDMTIITKQLAWKPKTPLDELLDVTLQYQHKTYSRAIQRELSKLSN 381


>emb|CAN62503.1| hypothetical protein VITISV_010651 [Vitis vinifera]
          Length = 382

 Score =  393 bits (1009), Expect = e-107
 Identities = 188/238 (78%), Positives = 215/238 (90%), Gaps = 2/238 (0%)
 Frame = +2

Query: 2   FLPQEY--RQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTI 175
           FLP ++  RQDP +Y+LKEDVSPCIFGPV KQRWSYACAKQM +RLIYAE AE+GLKFTI
Sbjct: 145 FLPADHSLRQDPDFYILKEDVSPCIFGPVEKQRWSYACAKQMIERLIYAEGAEHGLKFTI 204

Query: 176 VRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQRTFLYIKDAI 355
           VRP+NWIGPRMDFIPG+DGP++GVPRVLACFSNNLLRGEPLKLVDGG+SQRTF YIKDAI
Sbjct: 205 VRPFNWIGPRMDFIPGIDGPTEGVPRVLACFSNNLLRGEPLKLVDGGKSQRTFCYIKDAI 264

Query: 356 EAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSLSTLDVSSMD 535
           EAVLLMI+NPERANG IFNVGNPNNE ++++LAELMI+VY K+S V +S L+T+DVSS D
Sbjct: 265 EAVLLMIENPERANGQIFNVGNPNNEVTMRQLAELMIEVYGKIS-VGSSDLTTVDVSSKD 323

Query: 536 FYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIKKELSKPS 709
           FYG GYDDSD+RIPDMTII RQLGW P+TPL +LL+VTL YQHQTYS +IKK LS P+
Sbjct: 324 FYGVGYDDSDKRIPDMTIINRQLGWNPKTPLQDLLEVTLTYQHQTYSQSIKKALSNPT 381


>ref|XP_002274631.2| PREDICTED: bifunctional polymyxin resistance protein ArnA [Vitis
           vinifera]
          Length = 433

 Score =  392 bits (1006), Expect = e-107
 Identities = 187/238 (78%), Positives = 215/238 (90%), Gaps = 2/238 (0%)
 Frame = +2

Query: 2   FLPQEY--RQDPKYYMLKEDVSPCIFGPVHKQRWSYACAKQMTDRLIYAEHAENGLKFTI 175
           FLP ++  RQDP +Y+LKEDVSPCIFGPV KQRWSYACAKQM +RLIYAE AE+GLKFTI
Sbjct: 196 FLPADHSLRQDPDFYILKEDVSPCIFGPVEKQRWSYACAKQMIERLIYAEGAEHGLKFTI 255

Query: 176 VRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNNLLRGEPLKLVDGGRSQRTFLYIKDAI 355
           VRP+NWIGPRMDFIPG+DGP++GVPRVLACFSNNLLRGEPLKLVDGG+SQRTF YIKDAI
Sbjct: 256 VRPFNWIGPRMDFIPGIDGPTEGVPRVLACFSNNLLRGEPLKLVDGGKSQRTFCYIKDAI 315

Query: 356 EAVLLMIDNPERANGHIFNVGNPNNEASVKELAELMIKVYAKVSGVPASSLSTLDVSSMD 535
           EAVLLMI+NPERANG IFNVGNPNNE ++++LA+LMI+VY K+S V +S L+T+DVSS D
Sbjct: 316 EAVLLMIENPERANGQIFNVGNPNNEVTMRQLAQLMIEVYGKIS-VGSSDLTTVDVSSKD 374

Query: 536 FYGKGYDDSDRRIPDMTIITRQLGWKPRTPLDELLDVTLQYQHQTYSHAIKKELSKPS 709
           FYG GYDDSD+RIPDMTII RQLGW P+TPL +LL+VTL YQHQTYS +IKK LS P+
Sbjct: 375 FYGVGYDDSDKRIPDMTIINRQLGWNPKTPLQDLLEVTLTYQHQTYSQSIKKALSNPT 432


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