BLASTX nr result

ID: Glycyrrhiza23_contig00025353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025353
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...   197   1e-48
ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago ...   170   1e-40
ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811...   169   3e-40
ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795...   169   3e-40
ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795...   153   2e-35

>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1523

 Score =  197 bits (500), Expect = 1e-48
 Identities = 101/142 (71%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
 Frame = +1

Query: 1    ANAKFFIPVPAPSSNEQTMEAIATNNPEDNVANENPSTSSRNDLSYQSPKAPSPSFRQRF 180
            ANAKFFIP PAPSSNEQTMEAI  NN ED++A ENPSTS RND S+QSPK  S S  QR 
Sbjct: 1330 ANAKFFIPTPAPSSNEQTMEAIEENNQEDDLAYENPSTSYRNDWSFQSPKHASASTWQRC 1389

Query: 181  PSMGNMSYQEAMMNGSNSHSPHSRRTASWGGSIDDPFSPTKMSEIKPLGGALGMPPSTFM 360
            PSMGN +  EA+++GSNS SPHSRRT SWGGS D  +SPTKM EI PLG ALGMPPST+M
Sbjct: 1390 PSMGNFANHEAVVSGSNSRSPHSRRTVSWGGSTDVTYSPTKMREIMPLGEALGMPPSTYM 1449

Query: 361  SDEVSSMRTHTKSLSFG-NLHE 423
            SD++SSMRT  KS +FG +LHE
Sbjct: 1450 SDDISSMRTSMKSGNFGEDLHE 1471


>ref|XP_003611309.1| COPII coat assembly protein sec16 [Medicago truncatula]
            gi|355512644|gb|AES94267.1| COPII coat assembly protein
            sec16 [Medicago truncatula]
          Length = 1584

 Score =  170 bits (431), Expect = 1e-40
 Identities = 91/145 (62%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1    ANAKFFIPVPAPSSNEQTMEAIATNNPEDNVANENPSTSSRNDLSYQSPKAPSPSFRQRF 180
            ANAKFFIP P PSS+EQ MEAIA +N ED+ ANENPSTSS ND SY  PK       QRF
Sbjct: 1441 ANAKFFIPAPVPSSSEQNMEAIAESNLEDSAANENPSTSSTNDWSYHPPKHAQTMTMQRF 1500

Query: 181  PSMGNMSYQEAMMNGSNSHSPHSRRTASWGGSIDDPFSPTKMSEIKPLGGALGMPPSTFM 360
            PS GN+S ++   +G+ SH  HSRRTASW GS +D FSP KM EIKP G ALGMPPS FM
Sbjct: 1501 PSAGNIS-KQGQTDGNESHFSHSRRTASWSGSFNDSFSPPKMGEIKPSGAALGMPPSAFM 1559

Query: 361  SDEVSSMRTHTKSLSFG-NLHEVEL 432
             D  S M+  T+S SFG +L EVEL
Sbjct: 1560 PDPSSLMQGPTRSGSFGEDLQEVEL 1584


>ref|XP_003538737.1| PREDICTED: uncharacterized protein LOC100811102 [Glycine max]
          Length = 1423

 Score =  169 bits (429), Expect = 3e-40
 Identities = 92/145 (63%), Positives = 105/145 (72%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1    ANAKFFIPVPAPSSNEQTMEAIATNNPEDNVANENPSTSSRNDLSYQSPKAPSPSFRQRF 180
            ANAKFF+P PAPSSNEQ M+AIA    ED+  NE PSTS+ ND SY+SPK  S +  QRF
Sbjct: 1281 ANAKFFVPTPAPSSNEQAMDAIAEGKQEDSATNEYPSTSATNDWSYRSPKHVSSTAIQRF 1340

Query: 181  PSMGNMSYQEAMMNGSNSHSPHSRRTASWGGSIDDPFSPTKMSEIKPLGGALGMPPSTFM 360
            PSMGN+S Q A   GSNSH PHSRRTASW GS +D F+P KM  +KPLG ALGMP S + 
Sbjct: 1341 PSMGNISKQGA-TEGSNSHLPHSRRTASWSGSFNDSFTPQKMGNMKPLGEALGMPLSRYS 1399

Query: 361  SDEVSSMRTHTKSLSFG-NLHEVEL 432
             DE SSM    KS S+G +LHEVEL
Sbjct: 1400 PDE-SSMHKPVKSSSYGEDLHEVEL 1423


>ref|XP_003516665.1| PREDICTED: uncharacterized protein LOC100795053 [Glycine max]
          Length = 1424

 Score =  169 bits (429), Expect = 3e-40
 Identities = 91/144 (63%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
 Frame = +1

Query: 1    ANAKFFIPVPAPSSNEQTMEAIATNNPEDNVANENPSTSSRNDLSYQSPKAPSPSFRQRF 180
            ANAKFF+P PAPSSNE+T+EAI  +  EDN  NE PS S+ N+ SYQSPK  S +  QRF
Sbjct: 1282 ANAKFFVPTPAPSSNERTIEAIVESKQEDNATNEYPSISTTNEWSYQSPKHVSSTTIQRF 1341

Query: 181  PSMGNMSYQEAMMNGSNSHSPHSRRTASWGGSIDDPFSPTKMSEIKPLGGALGMPPSTFM 360
            PSMGN+S Q A  +G+NSH PHSRRTASW GS +D F+P KM  IKPLG ALGMPPS F 
Sbjct: 1342 PSMGNISNQVA-ADGNNSHLPHSRRTASWSGSFNDSFTPQKMGNIKPLGEALGMPPSRFS 1400

Query: 361  SDEVSSMRTHTKSLSFG-NLHEVE 429
             DE S M    KS S+G +LHEVE
Sbjct: 1401 PDE-SLMHKPVKSSSYGEDLHEVE 1423


>ref|XP_003516666.1| PREDICTED: uncharacterized protein LOC100795588 [Glycine max]
          Length = 1404

 Score =  153 bits (386), Expect = 2e-35
 Identities = 89/145 (61%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
 Frame = +1

Query: 1    ANAKFFIPVPAPSSNEQTMEAIATNNPEDNVANENPSTSSRNDLSYQSPKAPSPSFRQRF 180
            ANAKFF+P PAPS NEQTMEAIA +  ED+  NE          SYQSPK  S +  QRF
Sbjct: 1274 ANAKFFVPTPAPS-NEQTMEAIAESKQEDSATNE---------CSYQSPK--SSTTIQRF 1321

Query: 181  PSMGNMSYQEAMMNGSNSHSPHSRRTASWGGSIDDPFSPTKMSEIKPLGGALGMPPSTFM 360
            PS+GN+S Q A  +G+NSH PHSRRTASW GS +D F+P KM  IKPLG +LGMPPS F+
Sbjct: 1322 PSLGNISNQGAT-DGNNSHLPHSRRTASWSGSFNDSFTPRKMGNIKPLGESLGMPPSRFL 1380

Query: 361  SDEVSSMRTHTKSLSFG-NLHEVEL 432
             DE S MRTH KS S+G +L EVEL
Sbjct: 1381 PDE-SLMRTHVKSSSYGEDLQEVEL 1404


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