BLASTX nr result
ID: Glycyrrhiza23_contig00025304
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00025304 (639 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFK34406.1| unknown [Lotus japonicus] 159 3e-37 ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus tr... 152 5e-35 pir||T08999 hypothetical protein - spinach chloroplast 135 6e-30 ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp.... 131 1e-28 ref|XP_004174110.1| PREDICTED: photosystem II reaction center pr... 128 8e-28 >gb|AFK34406.1| unknown [Lotus japonicus] Length = 80 Score = 159 bits (403), Expect = 3e-37 Identities = 77/80 (96%), Positives = 78/80 (97%) Frame = -3 Query: 472 MRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 293 MRELRIPTRNTN IHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV Sbjct: 1 MRELRIPTRNTNAIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 60 Query: 292 MFLILQFTNKRTIPFDPPTP 233 +FLILQ TNKRTIPFDPPTP Sbjct: 61 IFLILQITNKRTIPFDPPTP 80 >ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus trichocarpa] gi|133712057|gb|ABO36700.1| conserved hypothetical protein [Populus trichocarpa] Length = 113 Score = 152 bits (384), Expect = 5e-35 Identities = 80/102 (78%), Positives = 83/102 (81%) Frame = -3 Query: 547 MCLTTQRIRGEASFRFLI*TE*FQEMRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEAN 368 M L T + G F F I QEMRELRIPTR TNPIHNDVPENTTFLLLDQPSGE Sbjct: 1 MRLATLKNWGRGLFHFCIWV---QEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEK 57 Query: 367 TTGTLINKMNEVAINAKTANWKAIVMFLILQFTNKRTIPFDP 242 TTGTLINK++EVAINAKTANWKAIVMFLILQ TNKRTIPFDP Sbjct: 58 TTGTLINKIDEVAINAKTANWKAIVMFLILQATNKRTIPFDP 99 >pir||T08999 hypothetical protein - spinach chloroplast Length = 90 Score = 135 bits (340), Expect = 6e-30 Identities = 66/86 (76%), Positives = 73/86 (84%) Frame = -3 Query: 472 MRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 293 MRELRIPTR TNP HNDVPENT FLLLDQPSGEANTTGTLI+K++EVAINAKTANWKAIV Sbjct: 1 MRELRIPTRKTNPSHNDVPENTIFLLLDQPSGEANTTGTLISKIDEVAINAKTANWKAIV 60 Query: 292 MFLILQFTNKRTIPFDPPTPSFNRQK 215 + +ILQ K+TIPFDP F + K Sbjct: 61 IRIILQAIKKQTIPFDPSISHFTKSK 86 >ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297334191|gb|EFH64609.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 76 Score = 131 bits (329), Expect = 1e-28 Identities = 66/73 (90%), Positives = 70/73 (95%) Frame = +3 Query: 258 VLLLVNWRIRNMTIAFQLAVFALIATSFILLISVPVVFASPEGWSSNKNVVFSGTSLWIG 437 +LLL+ WRI+NMTIAFQLAVFALI TS ILLISVPVVFASP+GWSSNKNVVFSGTSLWIG Sbjct: 4 ILLLIAWRIKNMTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIG 63 Query: 438 LVFLVGILNSLIS 476 LVFLVGILNSLIS Sbjct: 64 LVFLVGILNSLIS 76 >ref|XP_004174110.1| PREDICTED: photosystem II reaction center protein Z-like [Cucumis sativus] Length = 76 Score = 128 bits (322), Expect = 8e-28 Identities = 65/72 (90%), Positives = 68/72 (94%) Frame = +3 Query: 261 LLLVNWRIRNMTIAFQLAVFALIATSFILLISVPVVFASPEGWSSNKNVVFSGTSLWIGL 440 +LLV+WRIRNMTIAFQLAVFALI TS ILLISVPVVFASP+GWS NK VVFSGTSLWIGL Sbjct: 5 ILLVDWRIRNMTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKKVVFSGTSLWIGL 64 Query: 441 VFLVGILNSLIS 476 VFLVGILNSLIS Sbjct: 65 VFLVGILNSLIS 76