BLASTX nr result

ID: Glycyrrhiza23_contig00025304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025304
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34406.1| unknown [Lotus japonicus]                              159   3e-37
ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus tr...   152   5e-35
pir||T08999 hypothetical protein - spinach chloroplast                135   6e-30
ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp....   131   1e-28
ref|XP_004174110.1| PREDICTED: photosystem II reaction center pr...   128   8e-28

>gb|AFK34406.1| unknown [Lotus japonicus]
          Length = 80

 Score =  159 bits (403), Expect = 3e-37
 Identities = 77/80 (96%), Positives = 78/80 (97%)
 Frame = -3

Query: 472 MRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 293
           MRELRIPTRNTN IHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV
Sbjct: 1   MRELRIPTRNTNAIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 60

Query: 292 MFLILQFTNKRTIPFDPPTP 233
           +FLILQ TNKRTIPFDPPTP
Sbjct: 61  IFLILQITNKRTIPFDPPTP 80


>ref|YP_001109497.1| hypothetical protein Poptr_cp018 [Populus trichocarpa]
           gi|133712057|gb|ABO36700.1| conserved hypothetical
           protein [Populus trichocarpa]
          Length = 113

 Score =  152 bits (384), Expect = 5e-35
 Identities = 80/102 (78%), Positives = 83/102 (81%)
 Frame = -3

Query: 547 MCLTTQRIRGEASFRFLI*TE*FQEMRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEAN 368
           M L T +  G   F F I     QEMRELRIPTR TNPIHNDVPENTTFLLLDQPSGE  
Sbjct: 1   MRLATLKNWGRGLFHFCIWV---QEMRELRIPTRKTNPIHNDVPENTTFLLLDQPSGEEK 57

Query: 367 TTGTLINKMNEVAINAKTANWKAIVMFLILQFTNKRTIPFDP 242
           TTGTLINK++EVAINAKTANWKAIVMFLILQ TNKRTIPFDP
Sbjct: 58  TTGTLINKIDEVAINAKTANWKAIVMFLILQATNKRTIPFDP 99


>pir||T08999 hypothetical protein - spinach chloroplast
          Length = 90

 Score =  135 bits (340), Expect = 6e-30
 Identities = 66/86 (76%), Positives = 73/86 (84%)
 Frame = -3

Query: 472 MRELRIPTRNTNPIHNDVPENTTFLLLDQPSGEANTTGTLINKMNEVAINAKTANWKAIV 293
           MRELRIPTR TNP HNDVPENT FLLLDQPSGEANTTGTLI+K++EVAINAKTANWKAIV
Sbjct: 1   MRELRIPTRKTNPSHNDVPENTIFLLLDQPSGEANTTGTLISKIDEVAINAKTANWKAIV 60

Query: 292 MFLILQFTNKRTIPFDPPTPSFNRQK 215
           + +ILQ   K+TIPFDP    F + K
Sbjct: 61  IRIILQAIKKQTIPFDPSISHFTKSK 86


>ref|XP_002888350.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334191|gb|EFH64609.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 76

 Score =  131 bits (329), Expect = 1e-28
 Identities = 66/73 (90%), Positives = 70/73 (95%)
 Frame = +3

Query: 258 VLLLVNWRIRNMTIAFQLAVFALIATSFILLISVPVVFASPEGWSSNKNVVFSGTSLWIG 437
           +LLL+ WRI+NMTIAFQLAVFALI TS ILLISVPVVFASP+GWSSNKNVVFSGTSLWIG
Sbjct: 4   ILLLIAWRIKNMTIAFQLAVFALIITSSILLISVPVVFASPDGWSSNKNVVFSGTSLWIG 63

Query: 438 LVFLVGILNSLIS 476
           LVFLVGILNSLIS
Sbjct: 64  LVFLVGILNSLIS 76


>ref|XP_004174110.1| PREDICTED: photosystem II reaction center protein Z-like [Cucumis
           sativus]
          Length = 76

 Score =  128 bits (322), Expect = 8e-28
 Identities = 65/72 (90%), Positives = 68/72 (94%)
 Frame = +3

Query: 261 LLLVNWRIRNMTIAFQLAVFALIATSFILLISVPVVFASPEGWSSNKNVVFSGTSLWIGL 440
           +LLV+WRIRNMTIAFQLAVFALI TS ILLISVPVVFASP+GWS NK VVFSGTSLWIGL
Sbjct: 5   ILLVDWRIRNMTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKKVVFSGTSLWIGL 64

Query: 441 VFLVGILNSLIS 476
           VFLVGILNSLIS
Sbjct: 65  VFLVGILNSLIS 76


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