BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025296
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593032.1| Pentatricopeptide repeat-containing protein ...   197   8e-49
gb|ABN08277.1| Pentatricopeptide repeat [Medicago truncatula]         197   8e-49
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   138   6e-31

>ref|XP_003593032.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482080|gb|AES63283.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 627

 Score =  197 bits (502), Expect = 8e-49
 Identities = 106/185 (57%), Positives = 124/185 (67%)
 Frame = +1

Query: 22  MEISSLSTVAFGVGMAFRHXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXIKLRNSKPL 201
           MEISSLS V+FG  M FRH                                       P 
Sbjct: 1   MEISSLSAVSFG--MPFRHSSSSSSSSSSSISASSSTTHF------------------PS 40

Query: 202 SARKAATLEVQQASNLPSTLARVGEVLTVKELNATLHHFGNLNKFNHISQLFLWMRENRK 381
             RK+  L++Q AS+L STL  VG++LT+K+LNATLHHF N NKFNH+SQLFLWM+EN+K
Sbjct: 41  RTRKSPKLQLQHASDLTSTLTSVGQLLTMKDLNATLHHFANSNKFNHVSQLFLWMQENKK 100

Query: 382 LDASSYSHYVRFMANKLDAATMLELYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKL 561
           LD  SYSHY++FMANKLDA+TML+LYN IQ ESAKDNVYVCNSVL CL +KGKFD+ MKL
Sbjct: 101 LDVYSYSHYIKFMANKLDASTMLKLYNDIQVESAKDNVYVCNSVLSCLIKKGKFDTTMKL 160

Query: 562 FRQMK 576
           FRQMK
Sbjct: 161 FRQMK 165


>gb|ABN08277.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 368

 Score =  197 bits (502), Expect = 8e-49
 Identities = 106/185 (57%), Positives = 124/185 (67%)
 Frame = +1

Query: 22  MEISSLSTVAFGVGMAFRHXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXIKLRNSKPL 201
           MEISSLS V+FG  M FRH                                       P 
Sbjct: 1   MEISSLSAVSFG--MPFRHSSSSSSSSSSSISASSSTTHF------------------PS 40

Query: 202 SARKAATLEVQQASNLPSTLARVGEVLTVKELNATLHHFGNLNKFNHISQLFLWMRENRK 381
             RK+  L++Q AS+L STL  VG++LT+K+LNATLHHF N NKFNH+SQLFLWM+EN+K
Sbjct: 41  RTRKSPKLQLQHASDLTSTLTSVGQLLTMKDLNATLHHFANSNKFNHVSQLFLWMQENKK 100

Query: 382 LDASSYSHYVRFMANKLDAATMLELYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKL 561
           LD  SYSHY++FMANKLDA+TML+LYN IQ ESAKDNVYVCNSVL CL +KGKFD+ MKL
Sbjct: 101 LDVYSYSHYIKFMANKLDASTMLKLYNDIQVESAKDNVYVCNSVLSCLIKKGKFDTTMKL 160

Query: 562 FRQMK 576
           FRQMK
Sbjct: 161 FRQMK 165


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  179 bits (454), Expect = 3e-43
 Identities = 94/136 (69%), Positives = 112/136 (82%), Gaps = 2/136 (1%)
 Frame = +1

Query: 175 IKLRNSKPLS-ARKAATLEVQQASNLPSTLARVGEVLTVKELNATLHHFGNLNKFNHISQ 351
           +KL +SK  S ARKAATLEV+ AS+L S LARVG+ LTVK+LNA L+HF   NKFNHISQ
Sbjct: 32  VKLGSSKTFSSARKAATLEVRNASDLASALARVGDALTVKDLNAALYHFKKSNKFNHISQ 91

Query: 352 LFLWMRENRKLDASSYSHYVRFMA-NKLDAATMLELYNSIQDESAKDNVYVCNSVLRCLT 528
           LF WM+EN KLDA SYSHY+RFMA + LDAA ML+LY+SIQ++SAK NV VCNSVL CL 
Sbjct: 92  LFSWMQENNKLDALSYSHYIRFMASHNLDAAKMLQLYHSIQNQSAKINVLVCNSVLSCLI 151

Query: 529 RKGKFDSAMKLFRQMK 576
           +K KF+SA+ LF+QMK
Sbjct: 152 KKAKFNSALNLFQQMK 167


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/124 (55%), Positives = 95/124 (76%)
 Frame = +1

Query: 205 ARKAATLEVQQASNLPSTLARVGEVLTVKELNATLHHFGNLNKFNHISQLFLWMRENRKL 384
           AR++A LEVQQ+S+L S LAR+G++L V++LN  L HFG L ++  +SQLF WM+++ K+
Sbjct: 74  ARQSAILEVQQSSDLGSALARLGDMLKVQDLNVILRHFGKLCRWQDLSQLFDWMQKHEKI 133

Query: 385 DASSYSHYVRFMANKLDAATMLELYNSIQDESAKDNVYVCNSVLRCLTRKGKFDSAMKLF 564
             SSYS Y++FM   L+    LE+YNSIQDES ++NV VCNSVL CL R GKF++++KLF
Sbjct: 134 TFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLSCLIRNGKFENSLKLF 193

Query: 565 RQMK 576
            QMK
Sbjct: 194 HQMK 197


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  138 bits (348), Expect = 6e-31
 Identities = 65/134 (48%), Positives = 96/134 (71%)
 Frame = +1

Query: 175 IKLRNSKPLSARKAATLEVQQASNLPSTLARVGEVLTVKELNATLHHFGNLNKFNHISQL 354
           ++ R+SK   AR+AA LEVQQ+ +L S L R+G +L  ++LN  L + G  +++  +S+L
Sbjct: 75  VQRRHSKSYLARQAAILEVQQSPDLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKL 134

Query: 355 FLWMRENRKLDASSYSHYVRFMANKLDAATMLELYNSIQDESAKDNVYVCNSVLRCLTRK 534
           F WM+++ K+  SSY+ Y++FM   L+ A  LE+YNSI DES K+NV++CNSVL CL R 
Sbjct: 135 FDWMQQHSKISVSSYTSYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRS 194

Query: 535 GKFDSAMKLFRQMK 576
           GKFD ++KLF +MK
Sbjct: 195 GKFDISLKLFHKMK 208