BLASTX nr result

ID: Glycyrrhiza23_contig00025288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025288
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncat...   225   3e-57
ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243...   163   1e-38
emb|CBI30815.3| unnamed protein product [Vitis vinifera]              163   1e-38
emb|CAN77301.1| hypothetical protein VITISV_028745 [Vitis vinifera]   163   1e-38
ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative ...   152   3e-35

>ref|XP_003629894.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355523916|gb|AET04370.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 1215

 Score =  225 bits (573), Expect = 3e-57
 Identities = 104/119 (87%), Positives = 108/119 (90%)
 Frame = +1

Query: 1   TMCCKDDKIYCIIKDMMDSSVGSTSSVALKKYRIIGEHLYHNACELYSKISSFEAIIQRY 180
           TMC  DD+IYC+IKDM+DS VG TSS ALKKYRIIGE LYHNACELYSKISSFEA IQRY
Sbjct: 232 TMCRDDDEIYCVIKDMVDSPVGLTSSTALKKYRIIGEQLYHNACELYSKISSFEANIQRY 291

Query: 181 YFDVRPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPEYWMRYVDFMEAK 357
           YFD RPLDANQLQNWH YLDFIEL GDFDWAVKLYERCLIVCANYP+YWMRY DFMEAK
Sbjct: 292 YFDFRPLDANQLQNWHAYLDFIELHGDFDWAVKLYERCLIVCANYPDYWMRYADFMEAK 350


>ref|XP_002271803.2| PREDICTED: uncharacterized protein LOC100243465 [Vitis vinifera]
          Length = 1179

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/115 (64%), Positives = 90/115 (78%)
 Frame = +1

Query: 13  KDDKIYCIIKDMMDSSVGSTSSVALKKYRIIGEHLYHNACELYSKISSFEAIIQRYYFDV 192
           KDD++  I  D++D SVGS    AL+KY  IGE LY  AC++ +KI  FE  I+R YF V
Sbjct: 255 KDDEVSHITTDLLDPSVGSDRYKALQKYLSIGEQLYQKACQVDAKIHGFETHIRRPYFHV 314

Query: 193 RPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPEYWMRYVDFMEAK 357
           +PLD +QL+NWH YLDF+E+QGDFDWAVKLYERCLI CANYPE+WMRYV+FME K
Sbjct: 315 KPLDVSQLENWHQYLDFVEVQGDFDWAVKLYERCLIPCANYPEFWMRYVEFMEIK 369


>emb|CBI30815.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/115 (64%), Positives = 90/115 (78%)
 Frame = +1

Query: 13  KDDKIYCIIKDMMDSSVGSTSSVALKKYRIIGEHLYHNACELYSKISSFEAIIQRYYFDV 192
           KDD++  I  D++D SVGS    AL+KY  IGE LY  AC++ +KI  FE  I+R YF V
Sbjct: 210 KDDEVSHITTDLLDPSVGSDRYKALQKYLSIGEQLYQKACQVDAKIHGFETHIRRPYFHV 269

Query: 193 RPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPEYWMRYVDFMEAK 357
           +PLD +QL+NWH YLDF+E+QGDFDWAVKLYERCLI CANYPE+WMRYV+FME K
Sbjct: 270 KPLDVSQLENWHQYLDFVEVQGDFDWAVKLYERCLIPCANYPEFWMRYVEFMEIK 324


>emb|CAN77301.1| hypothetical protein VITISV_028745 [Vitis vinifera]
          Length = 559

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/115 (64%), Positives = 90/115 (78%)
 Frame = +1

Query: 13  KDDKIYCIIKDMMDSSVGSTSSVALKKYRIIGEHLYHNACELYSKISSFEAIIQRYYFDV 192
           KDD++  I  D++D SVGS    AL+KY  IGE LY  AC++ +KI  FE  I+R YF V
Sbjct: 18  KDDEVSHITTDLLDPSVGSDRYKALQKYLSIGEQLYQKACQVDAKIHGFETHIRRPYFHV 77

Query: 193 RPLDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPEYWMRYVDFMEAK 357
           +PLD +QL+NWH YLDF+E+QGDFDWAVKLYERCLI CANYPE+WMRYV+FME K
Sbjct: 78  KPLDVSQLENWHQYLDFVEVQGDFDWAVKLYERCLIPCANYPEFWMRYVEFMEIK 132


>ref|XP_002519747.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
           gi|223541164|gb|EEF42720.1| Pre-mRNA-processing protein
           prp39, putative [Ricinus communis]
          Length = 395

 Score =  152 bits (384), Expect = 3e-35
 Identities = 70/113 (61%), Positives = 87/113 (76%)
 Frame = +1

Query: 19  DKIYCIIKDMMDSSVGSTSSVALKKYRIIGEHLYHNACELYSKISSFEAIIQRYYFDVRP 198
           D I CIIK ++D S+GS  S  L+ Y+ IGE  +  A +L  KIS FE  I+R YF V+P
Sbjct: 219 DDIICIIKKLLDPSIGSARSKVLQNYKAIGELFFQEASKLNEKISYFETRIKRPYFHVKP 278

Query: 199 LDANQLQNWHDYLDFIELQGDFDWAVKLYERCLIVCANYPEYWMRYVDFMEAK 357
           L+A+QL+NW+ YL+F EL GDFDWAVKLYERCLI CANYPE+WMRYV+FME+K
Sbjct: 279 LNASQLENWNCYLNFAELHGDFDWAVKLYERCLIPCANYPEFWMRYVEFMESK 331


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