BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025230
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringsp...   115   3e-24
ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot viru...   108   3e-22

>gb|AAW63130.1| 31 kDa putative protein [Strawberry latent ringspot virus satellite
           RNA]
          Length = 287

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/103 (60%), Positives = 73/103 (70%), Gaps = 6/103 (5%)
 Frame = +1

Query: 49  LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRRERPQRAVTKQPV 228
           LPKRVRV SK +GR FTVGRHDLH+LPSGKRAWVP+R P +AGG+ RRERP     K   
Sbjct: 14  LPKRVRVVSKRSGRIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGNFRRERPLVVSHKTQQ 73

Query: 229 VRPIRAP--VKVENRFSPLCVEE----SLVAPQKSKLTYADVV 339
           VRPIR P  VK  NRF+PL V+E    ++ AP   K +YAD +
Sbjct: 74  VRPIRMPAAVKTSNRFAPLSVKEGVTAAVAAPINPKKSYADAL 116


>ref|NP_620833.1| 36 kDa protein [Strawberry latent ringspot virus satellite RNA]
           gi|478364|pir||JQ2018 hypothetical 36.5K protein -
           strawberry latent ringspot virus
           gi|312511|emb|CAA49480.1| 36 kDa protein [Strawberry
           latent ringspot virus satellite RNA]
          Length = 331

 Score =  108 bits (271), Expect = 3e-22
 Identities = 62/103 (60%), Positives = 69/103 (66%), Gaps = 6/103 (5%)
 Frame = +1

Query: 49  LPKRVRVCSKSTGRFFTVGRHDLHLLPSGKRAWVPLRNPTSAGGSSRRERPQRAVTKQPV 228
           LPKRVRV SK   R FTVGRHDLH+LPSGKRAWVP+R P +AGGS RRERP     K   
Sbjct: 14  LPKRVRVISKRRARIFTVGRHDLHVLPSGKRAWVPVRAPIAAGGSFRRERPPVVSHKTQQ 73

Query: 229 VRPIRAP--VKVENRFSPLCVEE---SLVAP-QKSKLTYADVV 339
           VRPIR P  VK  NRF+ L V+E     VAP    K +YAD +
Sbjct: 74  VRPIRTPTAVKTSNRFASLSVKEEAPEAVAPFNPKKKSYADAL 116