BLASTX nr result

ID: Glycyrrhiza23_contig00025220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025220
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-l...   357   1e-96
ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-l...   346   2e-93
ref|XP_003600881.1| ABC transporter like protein [Medicago trunc...   322   6e-86
ref|XP_002881696.1| hypothetical protein ARALYDRAFT_483048 [Arab...   316   3e-84
gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]           315   4e-84

>ref|XP_003538462.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  357 bits (916), Expect = 1e-96
 Identities = 178/226 (78%), Positives = 189/226 (83%)
 Frame = -2

Query: 680 LWRAGAKXXXXXXXXXXXXXXXXXXXSDDPETALKLCTTVPRRLFRDAVTAANIAFDYEY 501
           LWRAGAK                   SDDPETALKLC TVP RLFRDA TAANIAFDYEY
Sbjct: 4   LWRAGAKLSLVASAVGGGATAALIATSDDPETALKLCATVPHRLFRDAATAANIAFDYEY 63

Query: 500 SLWGLPEGSNERERIKHEVHFRSAQKLRDLCFQNGGVYIKLGQHLGQLEYLVPQEYVQTM 321
           SLWGL EGS+ERERIKHEVH RSAQKL+DLCF+NGGVYIKLGQHLGQLEYLVP+EYV+TM
Sbjct: 64  SLWGLLEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVRTM 123

Query: 320 RESMLNRCPVSSYEQICDVFKKELGETPDKIFSEFDPVPIASASLAQVHVAHTHDGQKVA 141
           RESMLNRCPVSSYEQ+C+VFKKELG+TPDKIFSEFDPVPIASASLAQVHVA THDGQKVA
Sbjct: 124 RESMLNRCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARTHDGQKVA 183

Query: 140 VKVQHXXXXXXXXXXXXTVELIVNTLHKFFPSFDYRWLVDEISESL 3
           VKVQH            TVEL+VNTLH+FFPSFDYRWL+DEISESL
Sbjct: 184 VKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLIDEISESL 229


>ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score =  346 bits (888), Expect = 2e-93
 Identities = 175/226 (77%), Positives = 185/226 (81%)
 Frame = -2

Query: 680 LWRAGAKXXXXXXXXXXXXXXXXXXXSDDPETALKLCTTVPRRLFRDAVTAANIAFDYEY 501
           LWRAGAK                   SDDPE ALKL  TVP RLFR A TAANIAFDYEY
Sbjct: 4   LWRAGAKLSLVASAVGGGATAALIATSDDPEMALKLFATVPHRLFRGAATAANIAFDYEY 63

Query: 500 SLWGLPEGSNERERIKHEVHFRSAQKLRDLCFQNGGVYIKLGQHLGQLEYLVPQEYVQTM 321
           SL G PEGS+ERERIKHEVH RSAQKL+DLCF+NGGVYIKLGQHLGQLEYLVP+EYVQTM
Sbjct: 64  SLRGFPEGSSERERIKHEVHLRSAQKLQDLCFKNGGVYIKLGQHLGQLEYLVPEEYVQTM 123

Query: 320 RESMLNRCPVSSYEQICDVFKKELGETPDKIFSEFDPVPIASASLAQVHVAHTHDGQKVA 141
           RESMLNRCPVSSYEQ+C+VFKKELG+TPDKIFSEFDPVPIASASLAQVHVA THDGQKVA
Sbjct: 124 RESMLNRCPVSSYEQVCNVFKKELGDTPDKIFSEFDPVPIASASLAQVHVARTHDGQKVA 183

Query: 140 VKVQHXXXXXXXXXXXXTVELIVNTLHKFFPSFDYRWLVDEISESL 3
           VKVQH            TVEL+VNTLH+FFPSFDYRWL+DEISESL
Sbjct: 184 VKVQHTHMTDTAAADHATVELVVNTLHRFFPSFDYRWLIDEISESL 229


>ref|XP_003600881.1| ABC transporter like protein [Medicago truncatula]
           gi|355489929|gb|AES71132.1| ABC transporter like protein
           [Medicago truncatula]
          Length = 657

 Score =  322 bits (824), Expect = 6e-86
 Identities = 173/261 (66%), Positives = 184/261 (70%), Gaps = 34/261 (13%)
 Frame = -2

Query: 683 SLWRAGAKXXXXXXXXXXXXXXXXXXXSDDPETALKLCTTVPRRLFRDAVTAANIAF--- 513
           SLWRAG K                   SDDP TALKL TT+PRRLF DAVTAANI F   
Sbjct: 3   SLWRAGTKLSLLATAIGGGSAAALIATSDDPATALKLSTTIPRRLFDDAVTAANIVFVMC 62

Query: 512 -----------DYEYSLWGLPEGSNERERIKHEVHFRSAQKLRDLCFQNGGVYIKLGQHL 366
                      DYEYSL G+PEGS ERE++KHEVH RSA++LRDLCF+NGG+YIKLGQHL
Sbjct: 63  YCYVALTLLIEDYEYSLHGIPEGSIEREKVKHEVHLRSAERLRDLCFKNGGIYIKLGQHL 122

Query: 365 GQLEYLVPQEYVQTMRESMLNRCPVSSYEQICDVFKKELGETPDK-----------IFSE 219
           GQLEYLVPQEYVQTMRESMLNRCPVSSYEQICDVFKKE G TPDK           +F+E
Sbjct: 123 GQLEYLVPQEYVQTMRESMLNRCPVSSYEQICDVFKKEFGATPDKVFTICFIPLNNVFAE 182

Query: 218 FDPVPIASASLAQVHVAHTHDGQKVAVKVQHXXXXXXXXXXXXTVELIVNTLHKFFPSFD 39
           FDPVPIASASLAQVHVAHTHDGQKVAVKVQH            TVELIVNTLH FFPSFD
Sbjct: 183 FDPVPIASASLAQVHVAHTHDGQKVAVKVQHSHMTETAAADQATVELIVNTLHNFFPSFD 242

Query: 38  YR---------WLVDEISESL 3
           YR         WL+DEI ESL
Sbjct: 243 YRYCYDAIVSLWLIDEIKESL 263


>ref|XP_002881696.1| hypothetical protein ARALYDRAFT_483048 [Arabidopsis lyrata subsp.
           lyrata] gi|297327535|gb|EFH57955.1| hypothetical protein
           ARALYDRAFT_483048 [Arabidopsis lyrata subsp. lyrata]
          Length = 538

 Score =  316 bits (809), Expect = 3e-84
 Identities = 153/227 (67%), Positives = 179/227 (78%)
 Frame = -2

Query: 683 SLWRAGAKXXXXXXXXXXXXXXXXXXXSDDPETALKLCTTVPRRLFRDAVTAANIAFDYE 504
           SLWR   K                   SDDP T LKLCT++P RL+R+ VTAA+IAFDYE
Sbjct: 5   SLWRTRTKLLVVGTSLCGGSGAAFIASSDDPSTTLKLCTSIPVRLYRNTVTAASIAFDYE 64

Query: 503 YSLWGLPEGSNERERIKHEVHFRSAQKLRDLCFQNGGVYIKLGQHLGQLEYLVPQEYVQT 324
           YSL GL EGS+ER ++KHEVH RSAQKL++LCF+NGG+YIKLGQH+GQLEYLVP+EYV T
Sbjct: 65  YSLLGLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVCT 124

Query: 323 MRESMLNRCPVSSYEQICDVFKKELGETPDKIFSEFDPVPIASASLAQVHVAHTHDGQKV 144
           MRESMLN+CPVSSYEQ+C+VFKKE+GE PDK+F+EFDPVPIASASLAQVHVA THDG+KV
Sbjct: 125 MRESMLNKCPVSSYEQVCEVFKKEVGEMPDKVFAEFDPVPIASASLAQVHVARTHDGKKV 184

Query: 143 AVKVQHXXXXXXXXXXXXTVELIVNTLHKFFPSFDYRWLVDEISESL 3
           AVKVQH             V ++VNTLH+ FPSFDYRWL+DE+SESL
Sbjct: 185 AVKVQHAHMTDTAAADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESL 231


>gb|AAM62483.1| putative ABC1 protein [Arabidopsis thaliana]
          Length = 538

 Score =  315 bits (808), Expect = 4e-84
 Identities = 151/227 (66%), Positives = 180/227 (79%)
 Frame = -2

Query: 683 SLWRAGAKXXXXXXXXXXXXXXXXXXXSDDPETALKLCTTVPRRLFRDAVTAANIAFDYE 504
           SLWR   K                   SDDP T LKLCT++P RL+R+ VTAA+IAFDYE
Sbjct: 5   SLWRTRTKLLVVGTALCGGSGAAFIASSDDPSTTLKLCTSIPVRLYRNTVTAASIAFDYE 64

Query: 503 YSLWGLPEGSNERERIKHEVHFRSAQKLRDLCFQNGGVYIKLGQHLGQLEYLVPQEYVQT 324
           YSL GL EGS+ER ++KHEVH RSAQKL++LCF+NGG+YIKLGQH+GQLEYLVP+EYV+T
Sbjct: 65  YSLLGLAEGSSERAKVKHEVHLRSAQKLQELCFKNGGIYIKLGQHIGQLEYLVPEEYVRT 124

Query: 323 MRESMLNRCPVSSYEQICDVFKKELGETPDKIFSEFDPVPIASASLAQVHVAHTHDGQKV 144
           MRESMLN+CP+SSYEQ+C+VFKKE+GE PD++F+EFDPVPIASASLAQVHVA THDG+KV
Sbjct: 125 MRESMLNKCPISSYEQVCEVFKKEVGEMPDQVFAEFDPVPIASASLAQVHVARTHDGKKV 184

Query: 143 AVKVQHXXXXXXXXXXXXTVELIVNTLHKFFPSFDYRWLVDEISESL 3
           AVKVQH             V ++VNTLH+ FPSFDYRWL+DE+SESL
Sbjct: 185 AVKVQHAHMTDTAAADTAAVGVLVNTLHRIFPSFDYRWLLDEMSESL 231


Top