BLASTX nr result

ID: Glycyrrhiza23_contig00025219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025219
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus v...   127   7e-28
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]      118   4e-25
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...   116   2e-24
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   113   1e-23
ref|XP_003604634.1| hypothetical protein MTR_4g015340 [Medicago ...   109   3e-22

>gb|AER13167.1| putative retrovirus-like polyprotein [Phaseolus vulgaris]
          Length = 1009

 Score =  127 bits (320), Expect = 7e-28
 Identities = 68/175 (38%), Positives = 106/175 (60%), Gaps = 8/175 (4%)
 Frame = -2

Query: 504  EHDQGNQFGFTSDQHKAIISLLKSIEQ-------QQHPVANQIATTSTSGPNHSGSGIIC 346
            E ++G ++  T+ Q++ +  L +           Q + V +  A T+      S +G I 
Sbjct: 552  EQEKG-EYHLTAQQYQVLSDLFRQSTNNNTAANIQVNRVGSFTADTNHKMAKRSPTGNIL 610

Query: 345  SIPNVFKSKQ-WILDTGATDHICFTLSEFQSYKRIKPVFVKLPDGSTIVSNFAGSVYFSE 169
            ++ N+   +  WILD+GATDH+C +LSEF SYK IKP+ + LP+G  + + ++G+V F+ 
Sbjct: 611  TLNNLQHGRNYWILDSGATDHVCSSLSEFTSYKSIKPISISLPNGHHVFAKYSGTVIFNH 670

Query: 168  HFYLTDVLYIPSFKFNLISVSKLTDSLACKLIFSSDSCCIQGPTSLRMIGAASLK 4
             FYL DVLY+P   FNL+S SKL+ ++ C LIFSS++C IQ  T+   IG  S+K
Sbjct: 671  KFYLIDVLYVPQLSFNLVSTSKLSLNMNCSLIFSSNNCMIQDNTTKERIGIVSVK 725


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/168 (39%), Positives = 105/168 (62%), Gaps = 11/168 (6%)
 Frame = -2

Query: 489 NQFGFTSDQHKAIISLLK------SIEQQQHPVANQIATTSTSG-PNHSGSGII----CS 343
           ++F  T +++  +++LL+      S+     P++N + T++ S  P+   +GI     C+
Sbjct: 323 SKFSLTQEKYDHLVALLQQANLLSSVSPPTGPISNHVHTSTISSVPDTQQTGISSVVSCA 382

Query: 342 IPNVFKSKQWILDTGATDHICFTLSEFQSYKRIKPVFVKLPDGSTIVSNFAGSVYFSEHF 163
           I +   S  WILD+GA +HIC +   F S+ +IKP  V LP+ +T++  +AG+V FS   
Sbjct: 383 IDSA--SHHWILDSGANNHICSSSLCFTSFYKIKPTNVNLPNKTTVLVQYAGNVSFSSSL 440

Query: 162 YLTDVLYIPSFKFNLISVSKLTDSLACKLIFSSDSCCIQGPTSLRMIG 19
           YLT+VLY P+F  NLISVSK+  SL+C + FS+DSC IQ  ++ RMIG
Sbjct: 441 YLTNVLYCPTFNLNLISVSKMCKSLSCFVNFSTDSCIIQELSTKRMIG 488


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score =  116 bits (291), Expect = 2e-24
 Identities = 67/171 (39%), Positives = 103/171 (60%), Gaps = 4/171 (2%)
 Frame = -2

Query: 504  EHDQGNQF-GFTSDQHKAIISLLKSIEQQQHPVAN--QIATTSTSGPNH-SGSGIICSIP 337
            +H + ++F  F+ +Q+KA+++L++        +    Q+A+ S+   N+ +  G+  S+ 
Sbjct: 678  QHHESHEFVRFSPEQYKALLALIQEPSAGNTALTQPKQVASISSCTVNNPTNPGMSLSLS 737

Query: 336  NVFKSKQWILDTGATDHICFTLSEFQSYKRIKPVFVKLPDGSTIVSNFAGSVYFSEHFYL 157
                S  WILD+GATDH+  +L    S+KRI P+ VKLP+G  + +  +G+V  S +  L
Sbjct: 738  ASLTS--WILDSGATDHVTCSLHNLHSHKRINPITVKLPNGQYVHATHSGTVQLSSNITL 795

Query: 156  TDVLYIPSFKFNLISVSKLTDSLACKLIFSSDSCCIQGPTSLRMIGAASLK 4
             DVLYIPSF FNLIS+SKL  S+ C+LIFSS SC +Q   +   IG    K
Sbjct: 796  HDVLYIPSFTFNLISISKLVSSINCELIFSSTSCVLQEMNNHMKIGIVEAK 846


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score =  113 bits (283), Expect = 1e-23
 Identities = 67/168 (39%), Positives = 97/168 (57%), Gaps = 7/168 (4%)
 Frame = -2

Query: 489 NQFGFTSDQHKAIISLLK------SIEQQQHPVANQIATTSTSGPNH-SGSGIICSIPNV 331
           +Q G T +Q+  ++SLL+      S         N +AT+  S  +  SG   I S    
Sbjct: 324 SQTGLTQEQYVHLVSLLQQSSLVPSATPPNPASTNHVATSFPSSIDFTSGINTIFSCSLH 383

Query: 330 FKSKQWILDTGATDHICFTLSEFQSYKRIKPVFVKLPDGSTIVSNFAGSVYFSEHFYLTD 151
             S  W++D+GA +HIC +L  F SY RIKP+ V LP+GS+++  +AG+V FS HF++T 
Sbjct: 384 VPSDHWLIDSGANEHICSSLHLFHSYYRIKPICVNLPNGSSVIVQYAGTVVFSPHFHITH 443

Query: 150 VLYIPSFKFNLISVSKLTDSLACKLIFSSDSCCIQGPTSLRMIGAASL 7
           VLY PSFK  LISVSK+  SL   + F  ++  IQ   + +MIG  +L
Sbjct: 444 VLYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIGLGNL 491


>ref|XP_003604634.1| hypothetical protein MTR_4g015340 [Medicago truncatula]
           gi|355505689|gb|AES86831.1| hypothetical protein
           MTR_4g015340 [Medicago truncatula]
          Length = 317

 Score =  109 bits (272), Expect = 3e-22
 Identities = 64/149 (42%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
 Frame = -2

Query: 444 LLKSIEQQQHPVANQIATTSTSGPNHSGSGII-CSIPNVFKSKQWILDTGATDHICFTLS 268
           LL S      P++N I T++TS P+ S S I  C++ +   S  W L++ A  HIC +L 
Sbjct: 86  LLASGSTSSPPISNHI-TSTTSFPSSSISTIFSCALSD--SSHDWSLNSSANAHICSSLH 142

Query: 267 EFQSYKRIKPVFVKLPDGSTIVSNFAGSVYFSEHFYLTDVLYIPSFKFNLISVSKLTDSL 88
            F SY  IKPV + LP+ +TI  + AG+V FS HF++T+VLY P+F  NLIS++K+  SL
Sbjct: 143 YFTSYHPIKPVLIHLPNKTTITIHHAGTVIFSPHFHITNVLYSPNFNVNLISIAKIISSL 202

Query: 87  ACKLIFSSDSCCIQGPTSLRMIGAASLKG 1
            C + F  D C IQ   + +MIG A   G
Sbjct: 203 NCYVKFLPDKCIIQDLITNKMIGLADPYG 231


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