BLASTX nr result

ID: Glycyrrhiza23_contig00025216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025216
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medica...    89   3e-16
ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816...    58   7e-07

>ref|XP_003609773.1| Pre-mRNA polyadenylation factor fip1 [Medicago truncatula]
           gi|355510828|gb|AES91970.1| Pre-mRNA polyadenylation
           factor fip1 [Medicago truncatula]
          Length = 1110

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 49/89 (55%), Positives = 57/89 (64%)
 Frame = +2

Query: 2   DKNSGSDNSNVHDLWEEGEFMXXXXXXXXXXXXXXXVLSEEQSEDVKNSKESSGQERNDL 181
           D NSGS   NV D  EE E +               VLS +Q ED K S+ SSGQERNDL
Sbjct: 293 DNNSGSVKCNVLDSSEERELISGVNRSKSNSSSEHDVLSNKQLEDAKQSELSSGQERNDL 352

Query: 182 IPDVVKTQHPDEEDQHSEDAEVLEDEINT 268
           IPDVVK Q+PDEED++SED +VLE+EI T
Sbjct: 353 IPDVVKIQNPDEEDRYSEDGKVLEEEIKT 381


>ref|XP_003547360.1| PREDICTED: uncharacterized protein LOC100816009 [Glycine max]
          Length = 1098

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   DKNSGSDNSNVHDLWEEGEFMXXXXXXXXXXXXXXX-VLSEEQSEDVKNSKESSGQERND 178
           D  SGS NS V D   EGE M                VLSE+Q EDVK +++SS Q R+ 
Sbjct: 303 DDCSGSGNSTVMDASLEGESMAGSKRNALNSSAELNEVLSEDQLEDVKKAEDSSLQRRSG 362

Query: 179 LIPDVVKTQHPDEEDQHSED-AEVLEDE 259
            IP V   +H D+ DQHSED AEV E E
Sbjct: 363 PIPGVDGDEHRDQADQHSEDTAEVPEGE 390


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