BLASTX nr result

ID: Glycyrrhiza23_contig00025199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025199
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...   105   4e-21
ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei...   101   7e-20
ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei...   101   7e-20
ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ...   100   1e-19
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    92   3e-17

>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score =  105 bits (262), Expect = 4e-21
 Identities = 53/87 (60%), Positives = 62/87 (71%)
 Frame = +1

Query: 1    FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180
            FNPLVIPKS++A+LPFASKPKDI KR +P LEERR +GVVMEPRERK+HALVQHLQL+N+
Sbjct: 1067 FNPLVIPKSLQASLPFASKPKDISKRNKPLLEERRGRGVVMEPRERKVHALVQHLQLINS 1126

Query: 181  XXXXXXXXXXXXXXXXXXXXRAKDEQL 261
                                R K+EQL
Sbjct: 1127 EKVKKRKLKEENKRKALEAERTKEEQL 1153


>ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507881|gb|AES89023.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1175

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/85 (61%), Positives = 58/85 (68%)
 Frame = +1

Query: 1    FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180
            FNPLVIPKS++ANLPF SKPK  PKRKR S ++RRQKGVV+EPRERKIHALVQHLQLM  
Sbjct: 1063 FNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKT 1122

Query: 181  XXXXXXXXXXXXXXXXXXXXRAKDE 255
                                RAK+E
Sbjct: 1123 EKIKKRKHKEGEKRKVLEAERAKEE 1147


>ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula]
            gi|355507880|gb|AES89022.1| Ribosome biogenesis protein
            BMS1-like protein [Medicago truncatula]
          Length = 1200

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/85 (61%), Positives = 58/85 (68%)
 Frame = +1

Query: 1    FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180
            FNPLVIPKS++ANLPF SKPK  PKRKR S ++RRQKGVV+EPRERKIHALVQHLQLM  
Sbjct: 1063 FNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKT 1122

Query: 181  XXXXXXXXXXXXXXXXXXXXRAKDE 255
                                RAK+E
Sbjct: 1123 EKIKKRKHKEGEKRKVLEAERAKEE 1147


>ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1176

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/59 (77%), Positives = 55/59 (93%)
 Frame = +1

Query: 1    FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMN 177
            FNP+VIPKS++A+LPFASKPKDI KRK+P LEERR +GVVMEPRERK+H LVQHLQL++
Sbjct: 1062 FNPVVIPKSLQASLPFASKPKDISKRKKPLLEERRARGVVMEPRERKVHTLVQHLQLID 1120


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 49/87 (56%), Positives = 58/87 (66%)
 Frame = +1

Query: 1    FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180
            FNPLVIPKS++A LPFASKPKDI KRK+P LE RR   VVMEP ERK+HALVQHLQ++ N
Sbjct: 1028 FNPLVIPKSLQAALPFASKPKDILKRKKPLLENRR--AVVMEPHERKVHALVQHLQMIRN 1085

Query: 181  XXXXXXXXXXXXXXXXXXXXRAKDEQL 261
                                +AK+EQ+
Sbjct: 1086 EKMKKRKLKETEKRKRFEAEKAKEEQV 1112


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