BLASTX nr result
ID: Glycyrrhiza23_contig00025199
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00025199 (263 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ... 105 4e-21 ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protei... 101 7e-20 ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protei... 101 7e-20 ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 ... 100 1e-19 ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 92 3e-17 >ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] Length = 1181 Score = 105 bits (262), Expect = 4e-21 Identities = 53/87 (60%), Positives = 62/87 (71%) Frame = +1 Query: 1 FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180 FNPLVIPKS++A+LPFASKPKDI KR +P LEERR +GVVMEPRERK+HALVQHLQL+N+ Sbjct: 1067 FNPLVIPKSLQASLPFASKPKDISKRNKPLLEERRGRGVVMEPRERKVHALVQHLQLINS 1126 Query: 181 XXXXXXXXXXXXXXXXXXXXRAKDEQL 261 R K+EQL Sbjct: 1127 EKVKKRKLKEENKRKALEAERTKEEQL 1153 >ref|XP_003606826.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula] gi|355507881|gb|AES89023.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula] Length = 1175 Score = 101 bits (251), Expect = 7e-20 Identities = 52/85 (61%), Positives = 58/85 (68%) Frame = +1 Query: 1 FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180 FNPLVIPKS++ANLPF SKPK PKRKR S ++RRQKGVV+EPRERKIHALVQHLQLM Sbjct: 1063 FNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKT 1122 Query: 181 XXXXXXXXXXXXXXXXXXXXRAKDE 255 RAK+E Sbjct: 1123 EKIKKRKHKEGEKRKVLEAERAKEE 1147 >ref|XP_003606825.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula] gi|355507880|gb|AES89022.1| Ribosome biogenesis protein BMS1-like protein [Medicago truncatula] Length = 1200 Score = 101 bits (251), Expect = 7e-20 Identities = 52/85 (61%), Positives = 58/85 (68%) Frame = +1 Query: 1 FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180 FNPLVIPKS++ANLPF SKPK PKRKR S ++RRQKGVV+EPRERKIHALVQHLQLM Sbjct: 1063 FNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKT 1122 Query: 181 XXXXXXXXXXXXXXXXXXXXRAKDE 255 RAK+E Sbjct: 1123 EKIKKRKHKEGEKRKVLEAERAKEE 1147 >ref|XP_003539035.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max] Length = 1176 Score = 100 bits (249), Expect = 1e-19 Identities = 46/59 (77%), Positives = 55/59 (93%) Frame = +1 Query: 1 FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMN 177 FNP+VIPKS++A+LPFASKPKDI KRK+P LEERR +GVVMEPRERK+H LVQHLQL++ Sbjct: 1062 FNPVVIPKSLQASLPFASKPKDISKRKKPLLEERRARGVVMEPRERKVHTLVQHLQLID 1120 >ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera] Length = 1139 Score = 92.4 bits (228), Expect = 3e-17 Identities = 49/87 (56%), Positives = 58/87 (66%) Frame = +1 Query: 1 FNPLVIPKSIEANLPFASKPKDIPKRKRPSLEERRQKGVVMEPRERKIHALVQHLQLMNN 180 FNPLVIPKS++A LPFASKPKDI KRK+P LE RR VVMEP ERK+HALVQHLQ++ N Sbjct: 1028 FNPLVIPKSLQAALPFASKPKDILKRKKPLLENRR--AVVMEPHERKVHALVQHLQMIRN 1085 Query: 181 XXXXXXXXXXXXXXXXXXXXRAKDEQL 261 +AK+EQ+ Sbjct: 1086 EKMKKRKLKETEKRKRFEAEKAKEEQV 1112