BLASTX nr result

ID: Glycyrrhiza23_contig00025193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025193
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-li...   140   1e-31
ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786...   136   2e-30
ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis tha...   104   9e-21
ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arab...   103   2e-20
ref|XP_002516959.1| conserved hypothetical protein [Ricinus comm...   100   9e-20

>ref|XP_003534838.1| PREDICTED: condensin-2 complex subunit H2-like [Glycine max]
          Length = 673

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/79 (89%), Positives = 73/79 (92%), Gaps = 3/79 (3%)
 Frame = +2

Query: 176 MTKDTSEPGG---GGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITSEEEGHIPVN 346
           MTK TSEPGG   GGFHAVHAERDLESNWEV+LAKKLEEYLLKICSGEIT EEEGH PVN
Sbjct: 1   MTKGTSEPGGSGSGGFHAVHAERDLESNWEVNLAKKLEEYLLKICSGEITGEEEGHSPVN 60

Query: 347 FAEAALLLQGSIQVYSRKV 403
           FAEAALLLQGS+QVYSRKV
Sbjct: 61  FAEAALLLQGSMQVYSRKV 79


>ref|XP_003547386.1| PREDICTED: uncharacterized protein LOC100786571 [Glycine max]
          Length = 674

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/79 (88%), Positives = 71/79 (89%), Gaps = 3/79 (3%)
 Frame = +2

Query: 176 MTKDTSEPGG---GGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITSEEEGHIPVN 346
           MTK TS+PGG   GGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEI  EEEGH  VN
Sbjct: 1   MTKGTSKPGGSGSGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEIIGEEEGHSHVN 60

Query: 347 FAEAALLLQGSIQVYSRKV 403
           FAEAALLLQGSIQVYSRKV
Sbjct: 61  FAEAALLLQGSIQVYSRKV 79


>ref|NP_188295.2| condensin-2 complex subunit H2 [Arabidopsis thaliana]
           gi|75274279|sp|Q9LUR0.1|CNDH2_ARATH RecName:
           Full=Condensin-2 complex subunit H2; AltName:
           Full=Chromosome-associated protein H2; Short=AtCAP-H2;
           AltName: Full=Non-SMC condensin II complex subunit H2;
           AltName: Full=Protein HYPERSENSITIVE TO EXCESS BORON 2;
           Short=Hypersensitive to excess B 2
           gi|11994628|dbj|BAB02765.1| unnamed protein product
           [Arabidopsis thaliana] gi|62533249|dbj|BAD95574.1|
           chromosoma associate protein subunit H2 [Arabidopsis
           thaliana] gi|110741945|dbj|BAE98913.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642337|gb|AEE75858.1| condensin-2 complex subunit
           H2 [Arabidopsis thaliana]
          Length = 683

 Score =  104 bits (259), Expect = 9e-21
 Identities = 53/71 (74%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
 Frame = +2

Query: 194 EPGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEIT-SEEEGHIPVNFAEAALLL 370
           E  G   H V  ERDL +NWEVDL++KLEEYLLKICSGEIT +EE+G IPVNFAEAALLL
Sbjct: 8   EVRGERIHTVQPERDLVANWEVDLSEKLEEYLLKICSGEITGNEEDGQIPVNFAEAALLL 67

Query: 371 QGSIQVYSRKV 403
           QGS+QVYS+KV
Sbjct: 68  QGSVQVYSKKV 78


>ref|XP_002885164.1| hypothetical protein ARALYDRAFT_897993 [Arabidopsis lyrata subsp.
           lyrata] gi|297331004|gb|EFH61423.1| hypothetical protein
           ARALYDRAFT_897993 [Arabidopsis lyrata subsp. lyrata]
          Length = 683

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/74 (72%), Positives = 61/74 (82%), Gaps = 6/74 (8%)
 Frame = +2

Query: 200 GGGG-----FHAVHAERDLESNWEVDLAKKLEEYLLKICSGEIT-SEEEGHIPVNFAEAA 361
           GGGG      H V  ERDL +NWEVDL++KLEEYLLKICSGEIT +EE+  IPVNFAEAA
Sbjct: 5   GGGGVRGERIHTVQPERDLVANWEVDLSEKLEEYLLKICSGEITGNEEDEQIPVNFAEAA 64

Query: 362 LLLQGSIQVYSRKV 403
           LLLQGS+QVYS+KV
Sbjct: 65  LLLQGSVQVYSKKV 78


>ref|XP_002516959.1| conserved hypothetical protein [Ricinus communis]
           gi|223544047|gb|EEF45573.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 667

 Score =  100 bits (250), Expect = 9e-20
 Identities = 49/63 (77%), Positives = 58/63 (92%)
 Frame = +2

Query: 215 HAVHAERDLESNWEVDLAKKLEEYLLKICSGEITSEEEGHIPVNFAEAALLLQGSIQVYS 394
           H V AERDLE+NW+VDLAKKLE+YLLK+CSGEITS++  ++ VNFAEAALLLQGS+QVYS
Sbjct: 15  HTVQAERDLEANWDVDLAKKLEDYLLKLCSGEITSDD--NVSVNFAEAALLLQGSVQVYS 72

Query: 395 RKV 403
           RKV
Sbjct: 73  RKV 75


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