BLASTX nr result

ID: Glycyrrhiza23_contig00025173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025173
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551387.1| PREDICTED: xyloglucan endotransglucosylase/h...   202   3e-50
gb|AGC54941.1| xyloglucan endotransglucosylase [Gossypium hirsutum]   184   9e-45
ref|XP_003635130.1| PREDICTED: putative xyloglucan endotransgluc...   175   4e-42
emb|CAN73201.1| hypothetical protein VITISV_006604 [Vitis vinifera]   175   4e-42
emb|CBI33049.3| unnamed protein product [Vitis vinifera]              170   1e-40

>ref|XP_003551387.1| PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like
           [Glycine max]
          Length = 289

 Score =  202 bits (513), Expect = 3e-50
 Identities = 96/116 (82%), Positives = 102/116 (87%), Gaps = 2/116 (1%)
 Frame = -2

Query: 342 SIDKTSGAGFRSKLGYASGFFQMRIKIPNKDSLGIVTAFYLTSKA--SVGGNHDEIDFEF 169
           SIDKTSGAGFRSKL YASGFFQMRIKIPNKD  G+VTAFYLTS A   +G  HDEIDFEF
Sbjct: 58  SIDKTSGAGFRSKLEYASGFFQMRIKIPNKDCRGVVTAFYLTSTAYKHLGAKHDEIDFEF 117

Query: 168 LGNNRDPYTLQTNVFASDEGGREQRHSLWFDPTIDFHTYGILWNQHQIVFYVDHVP 1
           LGNN  P+TLQTNVF +DEGGREQRHSLWFDPTI FHTYG+LWNQHQIVFYVD +P
Sbjct: 118 LGNNGQPHTLQTNVFTNDEGGREQRHSLWFDPTIIFHTYGVLWNQHQIVFYVDEIP 173


>gb|AGC54941.1| xyloglucan endotransglucosylase [Gossypium hirsutum]
          Length = 293

 Score =  184 bits (466), Expect = 9e-45
 Identities = 84/114 (73%), Positives = 96/114 (84%), Gaps = 1/114 (0%)
 Frame = -2

Query: 339 IDKTSGAGFRSKLGYASGFFQMRIKIPNKDSLGIVTAFYLTSKAS-VGGNHDEIDFEFLG 163
           +DK SGAGF S +GYASGFFQ++IK+PNKD  G+V AFYLTS     GGNHDE+DFEFLG
Sbjct: 52  MDKASGAGFESNVGYASGFFQIKIKLPNKDFSGVVVAFYLTSDPDGKGGNHDELDFEFLG 111

Query: 162 NNRDPYTLQTNVFASDEGGREQRHSLWFDPTIDFHTYGILWNQHQIVFYVDHVP 1
           +N  P+TLQTNVFA+DEGGREQR  LWFDPT DFHTYGI+WNQHQ+VFYVD  P
Sbjct: 112 SNGPPFTLQTNVFANDEGGREQRFHLWFDPTSDFHTYGIVWNQHQVVFYVDKTP 165


>ref|XP_003635130.1| PREDICTED: putative xyloglucan endotransglucosylase/hydrolase
           protein 1-like [Vitis vinifera]
          Length = 382

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/116 (70%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
 Frame = -2

Query: 342 SIDKTSGAGFRSKLGYASGFFQMRIKIPNKDSLGIVTAFYLTSKAS--VGGNHDEIDFEF 169
           SID+ SG+GF S   Y SGFF+MR+KIPNKDSLGI+T FYLTS+ +    GNHDE+DFEF
Sbjct: 148 SIDEYSGSGFMSNHTYGSGFFRMRMKIPNKDSLGIITTFYLTSQQNNQPAGNHDELDFEF 207

Query: 168 LGNNRDPYTLQTNVFASDEGGREQRHSLWFDPTIDFHTYGILWNQHQIVFYVDHVP 1
           LG +  PYTLQTNVF++D GGRE+R +LWFDPT DFHTY ILWNQHQIVFYVD +P
Sbjct: 208 LGGHGMPYTLQTNVFSNDNGGREERVALWFDPTADFHTYKILWNQHQIVFYVDKIP 263


>emb|CAN73201.1| hypothetical protein VITISV_006604 [Vitis vinifera]
          Length = 294

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/116 (70%), Positives = 96/116 (82%), Gaps = 2/116 (1%)
 Frame = -2

Query: 342 SIDKTSGAGFRSKLGYASGFFQMRIKIPNKDSLGIVTAFYLTSKAS--VGGNHDEIDFEF 169
           SID+ SG+GF S   Y SGFF+MR+KIPNKDSLGI+T FYLTS+ +    GNHDE+DFEF
Sbjct: 60  SIDEYSGSGFMSNHTYGSGFFRMRMKIPNKDSLGIITTFYLTSQQNNQPAGNHDELDFEF 119

Query: 168 LGNNRDPYTLQTNVFASDEGGREQRHSLWFDPTIDFHTYGILWNQHQIVFYVDHVP 1
           LG +  PYTLQTNVF++D GGRE+R +LWFDPT DFHTY ILWNQHQIVFYVD +P
Sbjct: 120 LGGHGMPYTLQTNVFSNDNGGREERVALWFDPTADFHTYKILWNQHQIVFYVDKIP 175


>emb|CBI33049.3| unnamed protein product [Vitis vinifera]
          Length = 290

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/114 (69%), Positives = 94/114 (82%)
 Frame = -2

Query: 342 SIDKTSGAGFRSKLGYASGFFQMRIKIPNKDSLGIVTAFYLTSKASVGGNHDEIDFEFLG 163
           SID+ SG+GF S   Y SGFF+MR+KIPNKDSLGI+T FY  ++ +  GNHDE+DFEFLG
Sbjct: 60  SIDEYSGSGFMSNHTYGSGFFRMRMKIPNKDSLGIITTFYQNNQPA--GNHDELDFEFLG 117

Query: 162 NNRDPYTLQTNVFASDEGGREQRHSLWFDPTIDFHTYGILWNQHQIVFYVDHVP 1
            +  PYTLQTNVF++D GGRE+R +LWFDPT DFHTY ILWNQHQIVFYVD +P
Sbjct: 118 GHGMPYTLQTNVFSNDNGGREERVALWFDPTADFHTYKILWNQHQIVFYVDKIP 171


Top