BLASTX nr result

ID: Glycyrrhiza23_contig00025151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025151
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556332.1| PREDICTED: structural maintenance of chromos...   172   3e-41
ref|XP_003599442.1| Structural maintenance of chromosomes protei...   162   3e-38
ref|XP_003613415.1| Structural maintenance of chromosomes protei...   161   6e-38
ref|XP_003609379.1| Structural maintenance of chromosomes protei...   157   9e-37
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos...   155   3e-36

>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
           [Glycine max]
          Length = 1059

 Score =  172 bits (436), Expect = 3e-41
 Identities = 82/86 (95%), Positives = 85/86 (98%)
 Frame = -3

Query: 260 PKRPKITRGEDDYVPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIAL 81
           PKRPKI+RG+DDY+PGNILEIEL NFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIAL
Sbjct: 7   PKRPKISRGDDDYMPGNILEIELCNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIAL 66

Query: 80  GLCGEPQLLGRATSIGAYVKRGEESG 3
           GLCGEPQLLGRATSIGAYVKRGEESG
Sbjct: 67  GLCGEPQLLGRATSIGAYVKRGEESG 92


>ref|XP_003599442.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355488490|gb|AES69693.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 294

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/85 (91%), Positives = 81/85 (95%)
 Frame = -3

Query: 257 KRPKITRGEDDYVPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG 78
           KR KI RGEDDY+PGNILEIEL NFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG
Sbjct: 8   KRHKINRGEDDYMPGNILEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG 67

Query: 77  LCGEPQLLGRATSIGAYVKRGEESG 3
           LCGEPQLLGRATSI A+VKRGE+SG
Sbjct: 68  LCGEPQLLGRATSIQAFVKRGEDSG 92


>ref|XP_003613415.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355514750|gb|AES96373.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 438

 Score =  161 bits (407), Expect = 6e-38
 Identities = 75/85 (88%), Positives = 80/85 (94%)
 Frame = -3

Query: 257 KRPKITRGEDDYVPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG 78
           KRPKITRGEDDY+PGNI+EIEL NFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG
Sbjct: 9   KRPKITRGEDDYMPGNIIEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG 68

Query: 77  LCGEPQLLGRATSIGAYVKRGEESG 3
           LCGEPQLLGRAT +  +VK G+ESG
Sbjct: 69  LCGEPQLLGRATCVAEFVKEGKESG 93


>ref|XP_003609379.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355510434|gb|AES91576.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 364

 Score =  157 bits (397), Expect = 9e-37
 Identities = 75/79 (94%), Positives = 77/79 (97%)
 Frame = -3

Query: 239 RGEDDYVPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQ 60
           RGEDDY+PGNILEIEL NFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQ
Sbjct: 3   RGEDDYMPGNILEIELHNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALGLCGEPQ 62

Query: 59  LLGRATSIGAYVKRGEESG 3
           LLGRATSI AYVKRGE+SG
Sbjct: 63  LLGRATSIPAYVKRGEDSG 81


>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
           vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
           product [Vitis vinifera]
          Length = 1051

 Score =  155 bits (392), Expect = 3e-36
 Identities = 76/85 (89%), Positives = 80/85 (94%)
 Frame = -3

Query: 257 KRPKITRGEDDYVPGNILEIELRNFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCAIALG 78
           KRPKITRGEDDY+PGNI EIEL NFMTF+ LKCKPG RLNLVIGPNGSGKSSLVCAIALG
Sbjct: 7   KRPKITRGEDDYLPGNITEIELHNFMTFNDLKCKPGSRLNLVIGPNGSGKSSLVCAIALG 66

Query: 77  LCGEPQLLGRATSIGAYVKRGEESG 3
           L G+PQLLGRA+SIGAYVKRGEESG
Sbjct: 67  LGGDPQLLGRASSIGAYVKRGEESG 91


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