BLASTX nr result

ID: Glycyrrhiza23_contig00025136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025136
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615959.1| RING finger protein [Medicago truncatula] gi...   187   1e-45
ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase liste...   179   2e-43
ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   131   6e-29
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...   112   3e-23
ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   110   2e-22

>ref|XP_003615959.1| RING finger protein [Medicago truncatula]
           gi|355517294|gb|AES98917.1| RING finger protein
           [Medicago truncatula]
          Length = 1683

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/113 (76%), Positives = 103/113 (91%)
 Frame = -2

Query: 340 FYLEFFKNLWVGRKTSLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNI 161
           F+L+FFK+LW GRKTSLSADRLAFFQ+F+ECFLWSLKNASRYN G+DSI+HFRVTL+DNI
Sbjct: 208 FFLDFFKSLWAGRKTSLSADRLAFFQSFEECFLWSLKNASRYNGGDDSISHFRVTLIDNI 267

Query: 160 LVKLLWQDFLMTGSLKGHDIINTGKDGDSSEHNVAHNKKVDLLNMKYPMPYLQ 2
           LVKL+W+DFL TGS KG+DII TGK+ DSSE  ++H+KKVD+ N KYPMPYLQ
Sbjct: 268 LVKLIWRDFLTTGSSKGYDII-TGKESDSSEKTLSHSKKVDVQNTKYPMPYLQ 319


>ref|XP_003518333.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like [Glycine max]
          Length = 1885

 Score =  179 bits (455), Expect = 2e-43
 Identities = 85/113 (75%), Positives = 98/113 (86%)
 Frame = -2

Query: 340 FYLEFFKNLWVGRKTSLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVDNI 161
           F+LEFFKNLW GR+ SLSADRLAF QA KECFLWSLKNASRYNDG DSI HF+VTL+DN+
Sbjct: 400 FFLEFFKNLWSGRRISLSADRLAFLQALKECFLWSLKNASRYNDG-DSIRHFQVTLIDNV 458

Query: 160 LVKLLWQDFLMTGSLKGHDIINTGKDGDSSEHNVAHNKKVDLLNMKYPMPYLQ 2
           LVKLLW+DFL  G  K +DIIN+GK  D+SE NV+HNKKVD+++ KYPMPYLQ
Sbjct: 459 LVKLLWKDFLTAGIPKANDIINSGKATDTSEENVSHNKKVDMVDTKYPMPYLQ 511


>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           listerin-like [Vitis vinifera]
          Length = 1923

 Score =  131 bits (329), Expect = 6e-29
 Identities = 62/117 (52%), Positives = 83/117 (70%), Gaps = 4/117 (3%)
 Frame = -2

Query: 340 FYLEFFKNLWVGRKTS--LSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVD 167
           F+LEFF+NLWVGR  S   +ADR+AFFQAFKECFLW L NASRY +G D+I+HFRVTL+D
Sbjct: 413 FFLEFFQNLWVGRNPSNPSNADRVAFFQAFKECFLWGLHNASRYCNGVDAIHHFRVTLID 472

Query: 166 NILVKLLWQDFLMTGSLKGHDIINTGKDGDSSEHN--VAHNKKVDLLNMKYPMPYLQ 2
           ++LVKL W +++   S K  D++  G   D SE +  + H + ++  N+KYP  Y Q
Sbjct: 473 SVLVKLFWHEYMSFSSSKNQDVVRWGNSKDPSESSTQLVHKRAMEKQNIKYPKSYAQ 529


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
           gi|223543141|gb|EEF44675.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1912

 Score =  112 bits (280), Expect = 3e-23
 Identities = 58/117 (49%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
 Frame = -2

Query: 340 FYLEFFKNLWVGRKTSLS--ADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVD 167
           F+L+FF NLW GR +S S  AD L FF AFKECFLW L+NASRY +  DS++ FRVT+V 
Sbjct: 395 FFLDFFHNLWDGRTSSHSTIADVLKFFSAFKECFLWGLQNASRYCENPDSVHQFRVTIVS 454

Query: 166 NILVKLLWQDFLMTGSLKGHDIINTGKDGDSSEH--NVAHNKKVDLLNMKYPMPYLQ 2
           NIL+KLLWQ++L        +    G   D  +H   ++  K V+  N+KYPM Y Q
Sbjct: 455 NILIKLLWQEYLFFAGSNNQNEAPIGTSEDPPKHAGAISLQKIVESRNIKYPMSYCQ 511


>ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           listerin-like [Cucumis sativus]
          Length = 1755

 Score =  110 bits (274), Expect = 2e-22
 Identities = 61/116 (52%), Positives = 77/116 (66%), Gaps = 3/116 (2%)
 Frame = -2

Query: 340 FYLEFFKNLWVGRKT--SLSADRLAFFQAFKECFLWSLKNASRYNDGEDSINHFRVTLVD 167
           F L+FF NLWVGR    S S +RLAFFQAFKECFLW ++NAS + +G+D   HF+VTLVD
Sbjct: 416 FLLDFFDNLWVGRNPFHSSSTERLAFFQAFKECFLWGIQNASSFCNGDD-FAHFQVTLVD 474

Query: 166 NILVKLLWQDFLMTGSLKGHDIINTGKDGDSSEHNVAHNKKV-DLLNMKYPMPYLQ 2
            ILVK+LW+D+L    LK  D +        SE    +NK + D+ + KYPM YLQ
Sbjct: 475 AILVKILWKDYLHVQCLKNQDRV-------FSEDEPLNNKMIEDIPSTKYPMSYLQ 523


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