BLASTX nr result

ID: Glycyrrhiza23_contig00025134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025134
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated...   343   1e-92
ref|XP_003601650.1| Small subunit processome component-like prot...   321   5e-86
ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255...   272   3e-71
emb|CBI17281.3| unnamed protein product [Vitis vinifera]              272   3e-71
emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]   272   3e-71

>ref|XP_003552811.1| PREDICTED: U3 small nucleolar RNA-associated protein 20-like [Glycine
            max]
          Length = 2653

 Score =  343 bits (880), Expect = 1e-92
 Identities = 171/192 (89%), Positives = 183/192 (95%)
 Frame = +2

Query: 2    IRDEARSALATCLKELGLEYLQFIVKVLQSTLKRGYELHVLGYTLNFILSKCLSGPVSGK 181
            IRDEARSALATCLKELGLEYLQFI+KVLQSTL+RGYELHVLGYTLNFILSKCLS PV+GK
Sbjct: 1782 IRDEARSALATCLKELGLEYLQFILKVLQSTLRRGYELHVLGYTLNFILSKCLSSPVAGK 1841

Query: 182  IDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYALK 361
            IDYCL DLLSVIENDILG VAEQKEVEKIA+KMKETRRKKSFESLKLVAQN+TFKSYALK
Sbjct: 1842 IDYCLEDLLSVIENDILGDVAEQKEVEKIASKMKETRRKKSFESLKLVAQNVTFKSYALK 1901

Query: 362  LLAPVTTHLQKQVTPNVKGKLENMLHYIAAGIESNPSVDQTDLFIFIYGIIEDGLKDEIG 541
            LLAPVT HL+K +TPNVKGKLENML +IA GIESNPSVDQTDLFIF+YGIIEDGL DEIG
Sbjct: 1902 LLAPVTAHLKKHITPNVKGKLENMLQHIATGIESNPSVDQTDLFIFVYGIIEDGLNDEIG 1961

Query: 542  WHENKMIKLKDK 577
            WHENK++KL+ K
Sbjct: 1962 WHENKLLKLEGK 1973


>ref|XP_003601650.1| Small subunit processome component-like protein [Medicago truncatula]
            gi|355490698|gb|AES71901.1| Small subunit processome
            component-like protein [Medicago truncatula]
          Length = 2733

 Score =  321 bits (823), Expect = 5e-86
 Identities = 162/192 (84%), Positives = 178/192 (92%)
 Frame = +2

Query: 2    IRDEARSALATCLKELGLEYLQFIVKVLQSTLKRGYELHVLGYTLNFILSKCLSGPVSGK 181
            IRDEARSALATCLKELGLEYLQFIVKVL+STLKRGYELHVLGYTL+FILSKCLS  + GK
Sbjct: 1814 IRDEARSALATCLKELGLEYLQFIVKVLRSTLKRGYELHVLGYTLHFILSKCLSSAICGK 1873

Query: 182  IDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYALK 361
            IDYCLGDLLSVIENDILG VAEQKEVEKIA+KMKET++K SFESLK VAQN+TFKS ALK
Sbjct: 1874 IDYCLGDLLSVIENDILGVVAEQKEVEKIASKMKETKKKTSFESLKFVAQNVTFKSCALK 1933

Query: 362  LLAPVTTHLQKQVTPNVKGKLENMLHYIAAGIESNPSVDQTDLFIFIYGIIEDGLKDEIG 541
            LLAP+T HLQK VT NVKGKLENMLH IAAGIESNPSVDQTDLF+FIY I++DGLK+EIG
Sbjct: 1934 LLAPMTAHLQKHVTQNVKGKLENMLHSIAAGIESNPSVDQTDLFVFIYRIVDDGLKNEIG 1993

Query: 542  WHENKMIKLKDK 577
             HE+K++K +DK
Sbjct: 1994 RHESKLLKSEDK 2005


>ref|XP_002263943.2| PREDICTED: uncharacterized protein LOC100255444 [Vitis vinifera]
          Length = 3196

 Score =  272 bits (695), Expect = 3e-71
 Identities = 134/178 (75%), Positives = 160/178 (89%)
 Frame = +2

Query: 2    IRDEARSALATCLKELGLEYLQFIVKVLQSTLKRGYELHVLGYTLNFILSKCLSGPVSGK 181
            +RD+ARSALA CLKELGLEYLQFIV VL++TLKRGYELHVLGYTL+FILSKCL  P+SGK
Sbjct: 1302 VRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYELHVLGYTLHFILSKCL--PISGK 1359

Query: 182  IDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYALK 361
            +DYCL DLLS+++NDILG VAE+KEVEKIA+KMKETR++KSFE+LKL+AQ+I FKS+ALK
Sbjct: 1360 LDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRKRKSFETLKLIAQSIMFKSHALK 1419

Query: 362  LLAPVTTHLQKQVTPNVKGKLENMLHYIAAGIESNPSVDQTDLFIFIYGIIEDGLKDE 535
            LL+PV  HLQ  +TP VK  LE ML++IAAGIE NPSVDQTDLFIF+YG++EDG+  E
Sbjct: 1420 LLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSVDQTDLFIFVYGLVEDGISKE 1477


>emb|CBI17281.3| unnamed protein product [Vitis vinifera]
          Length = 2629

 Score =  272 bits (695), Expect = 3e-71
 Identities = 134/178 (75%), Positives = 160/178 (89%)
 Frame = +2

Query: 2    IRDEARSALATCLKELGLEYLQFIVKVLQSTLKRGYELHVLGYTLNFILSKCLSGPVSGK 181
            +RD+ARSALA CLKELGLEYLQFIV VL++TLKRGYELHVLGYTL+FILSKCL  P+SGK
Sbjct: 1759 VRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYELHVLGYTLHFILSKCL--PISGK 1816

Query: 182  IDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYALK 361
            +DYCL DLLS+++NDILG VAE+KEVEKIA+KMKETR++KSFE+LKL+AQ+I FKS+ALK
Sbjct: 1817 LDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRKRKSFETLKLIAQSIMFKSHALK 1876

Query: 362  LLAPVTTHLQKQVTPNVKGKLENMLHYIAAGIESNPSVDQTDLFIFIYGIIEDGLKDE 535
            LL+PV  HLQ  +TP VK  LE ML++IAAGIE NPSVDQTDLFIF+YG++EDG+  E
Sbjct: 1877 LLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSVDQTDLFIFVYGLVEDGISKE 1934


>emb|CAN75046.1| hypothetical protein VITISV_023142 [Vitis vinifera]
          Length = 2461

 Score =  272 bits (695), Expect = 3e-71
 Identities = 134/178 (75%), Positives = 160/178 (89%)
 Frame = +2

Query: 2    IRDEARSALATCLKELGLEYLQFIVKVLQSTLKRGYELHVLGYTLNFILSKCLSGPVSGK 181
            +RD+ARSALA CLKELGLEYLQFIV VL++TLKRGYELHVLGYTL+FILSKCL  P+SGK
Sbjct: 1566 VRDDARSALAACLKELGLEYLQFIVSVLRATLKRGYELHVLGYTLHFILSKCL--PISGK 1623

Query: 182  IDYCLGDLLSVIENDILGYVAEQKEVEKIAAKMKETRRKKSFESLKLVAQNITFKSYALK 361
            +DYCL DLLS+++NDILG VAE+KEVEKIA+KMKETR++KSFE+LKL+AQ+I FKS+ALK
Sbjct: 1624 LDYCLEDLLSIVKNDILGDVAEEKEVEKIASKMKETRKRKSFETLKLIAQSIMFKSHALK 1683

Query: 362  LLAPVTTHLQKQVTPNVKGKLENMLHYIAAGIESNPSVDQTDLFIFIYGIIEDGLKDE 535
            LL+PV  HLQ  +TP VK  LE ML++IAAGIE NPSVDQTDLFIF+YG++EDG+  E
Sbjct: 1684 LLSPVIAHLQNHLTPKVKLNLETMLNHIAAGIECNPSVDQTDLFIFVYGLVEDGISKE 1741


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