BLASTX nr result

ID: Glycyrrhiza23_contig00025124 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00025124
         (1066 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540739.1| PREDICTED: zinc finger CCCH domain-containin...   462   e-128
ref|XP_003539207.1| PREDICTED: zinc finger CCCH domain-containin...   449   e-124
ref|XP_003606395.1| Zinc finger CCCH domain-containing protein [...   423   e-116
ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containin...   340   4e-91
emb|CBI16305.3| unnamed protein product [Vitis vinifera]              335   9e-90

>ref|XP_003540739.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
            [Glycine max]
          Length = 888

 Score =  462 bits (1189), Expect = e-128
 Identities = 238/336 (70%), Positives = 272/336 (80%)
 Frame = +2

Query: 59   MAEPLLNAELFSFKTLDPINAQDSTSEPNLTAPQGAQITEVNDDVVPTEKRKRDDGDGDA 238
            MAEPL N EL S KTLDP N  DSTSEP+ TAP+ +Q+    DDVVPT KRKRDD   D 
Sbjct: 1    MAEPLSNTELSSSKTLDPTNGHDSTSEPHQTAPEDSQLNR-EDDVVPTAKRKRDDDVED- 58

Query: 239  ERSLHPLWKTSLCSYFRSHNGTCSHGDECRYAHGEEELRPRPDNTWDPTSERAKKALKSE 418
             RSLHPLWKTSLCSYFRSHNG+CSHG  CRYAHGEEELRPRPDNTWDPTSERAKKALK+E
Sbjct: 59   -RSLHPLWKTSLCSYFRSHNGSCSHGGACRYAHGEEELRPRPDNTWDPTSERAKKALKTE 117

Query: 419  TGERCAVTEGVMMTEAXXXXXXXXXXXXCASNHALSKCLVHLQRNWSSENLRNFLNDEGI 598
            + E+ AV+E VMMTEA            C +NHAL+ CLVHL R WSSENLR FL+++GI
Sbjct: 118  SDEKRAVSEEVMMTEAVVDDGDDG----CGANHALNICLVHLPRKWSSENLRTFLSEQGI 173

Query: 599  PFKHAKKKKGMMIGFVSFEDEEQMKSSSKDLEGKSIGNKKLKVADVIPRSFEKKGNSDVG 778
            PFKHAKKKKGMMIGFV+FEDEEQ+KSS+ +LEGKSIGNK +KVA+V+PRSFEKK N+ V 
Sbjct: 174  PFKHAKKKKGMMIGFVTFEDEEQLKSSTMELEGKSIGNKTVKVANVLPRSFEKKSNAIVA 233

Query: 779  LQSPQLNKENSGVDVPSNGALGAETNDDNNLATDGSLSKTRSLREVVTPLAHMAYADQLE 958
             +  +L++EN+GVDV S+G L  ETN+DN       L+KTR++R+ VTPLAHMAYADQLE
Sbjct: 234  SRQ-ELDEENAGVDVASSGTLDGETNNDN-------LAKTRNVRDAVTPLAHMAYADQLE 285

Query: 959  QKKSSLMQILKRLTRNARKACPTGVPLPEWILKSRE 1066
            QK SSLMQILK+LTRNARKACP GV LPEWILKSRE
Sbjct: 286  QKTSSLMQILKKLTRNARKACPNGVSLPEWILKSRE 321


>ref|XP_003539207.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
            [Glycine max]
          Length = 833

 Score =  449 bits (1155), Expect = e-124
 Identities = 230/336 (68%), Positives = 264/336 (78%)
 Frame = +2

Query: 59   MAEPLLNAELFSFKTLDPINAQDSTSEPNLTAPQGAQITEVNDDVVPTEKRKRDDGDGDA 238
            M EPL N EL S KTLDP N  DSTSEP+ TAP+  ++    DDVVPT KRKR+DG  + 
Sbjct: 1    MTEPLSNTELSSSKTLDPTNRHDSTSEPHQTAPEEVELNR-EDDVVPTAKRKRNDGVVE- 58

Query: 239  ERSLHPLWKTSLCSYFRSHNGTCSHGDECRYAHGEEELRPRPDNTWDPTSERAKKALKSE 418
            +R LHPLWKTSLCSYFRSHNG+CSHG  CRYAHGEEELR RPDNTWDPTSERAKKALK+E
Sbjct: 59   DRLLHPLWKTSLCSYFRSHNGSCSHGGACRYAHGEEELRLRPDNTWDPTSERAKKALKTE 118

Query: 419  TGERCAVTEGVMMTEAXXXXXXXXXXXXCASNHALSKCLVHLQRNWSSENLRNFLNDEGI 598
            + ++ AV+E VMMTEA            C +NHALSKCLVHL R WSSEN R FL+++GI
Sbjct: 119  SDDKRAVSEEVMMTEAVVDDGDADGDDGCGANHALSKCLVHLPRKWSSENFRTFLSEQGI 178

Query: 599  PFKHAKKKKGMMIGFVSFEDEEQMKSSSKDLEGKSIGNKKLKVADVIPRSFEKKGNSDVG 778
             FKHAKKKKGMMIGFV+FEDEEQ+KSS+K+LEGKSIGNK +KVADV+PRSFEKK N+ V 
Sbjct: 179  AFKHAKKKKGMMIGFVTFEDEEQLKSSTKELEGKSIGNKTVKVADVLPRSFEKKSNASVA 238

Query: 779  LQSPQLNKENSGVDVPSNGALGAETNDDNNLATDGSLSKTRSLREVVTPLAHMAYADQLE 958
                   + + GVDV S+G L  ETN+DN       L+KTR++R+ VTPLAHMAYADQLE
Sbjct: 239  SH----QELDEGVDVASSGTLDGETNNDN-------LAKTRNVRDAVTPLAHMAYADQLE 287

Query: 959  QKKSSLMQILKRLTRNARKACPTGVPLPEWILKSRE 1066
            QKKS+LM ILK+LTRNARKACP GV LPEWILKSRE
Sbjct: 288  QKKSALMLILKKLTRNARKACPNGVSLPEWILKSRE 323


>ref|XP_003606395.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355507450|gb|AES88592.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 850

 Score =  423 bits (1088), Expect = e-116
 Identities = 227/335 (67%), Positives = 252/335 (75%), Gaps = 6/335 (1%)
 Frame = +2

Query: 80   AELFSFKTLD-PINAQDSTSEPNLTAPQGAQITEVNDDVVPTEKRKRDDGDGDAER---- 244
            +EL   K L+ PINA DSTSEP+ T P+  QI E  +DVV TEKRKRDDGDG+A+     
Sbjct: 5    SELSPSKILETPINAHDSTSEPHPTPPKSPQINEPINDVVTTEKRKRDDGDGNADEDDKP 64

Query: 245  SLHPLWKTSLCSYFRSHNGTCSHGDECRYAHGEEELRPRPDNTWDPTSERAKKALKSETG 424
            SLHPLWKTSLCSYFR H+ TCSHGD CRYAH EEELR RPDNTWDPTSER KK LKS TG
Sbjct: 65   SLHPLWKTSLCSYFRKHS-TCSHGDTCRYAHSEEELRQRPDNTWDPTSERGKKMLKSVTG 123

Query: 425  ERCAVTEGVMMTE-AXXXXXXXXXXXXCASNHALSKCLVHLQRNWSSENLRNFLNDEGIP 601
            E+ AV +GVMMTE               ASN ALSKCLVHL   W+SENLR FLN++GIP
Sbjct: 124  EKIAVKDGVMMTELVDEVDGDGGGEEGFASNQALSKCLVHLPMKWTSENLRTFLNEQGIP 183

Query: 602  FKHAKKKKGMMIGFVSFEDEEQMKSSSKDLEGKSIGNKKLKVADVIPRSFEKKGNSDVGL 781
            FKHAK +KGM IGFV+FEDEEQMKSS+KDL+GK IGNK L+VADV PRSFEKK NS    
Sbjct: 184  FKHAKTRKGMSIGFVTFEDEEQMKSSAKDLQGKQIGNKTLEVADVNPRSFEKKSNS---- 239

Query: 782  QSPQLNKENSGVDVPSNGALGAETNDDNNLATDGSLSKTRSLREVVTPLAHMAYADQLEQ 961
                        +VPS+G LG ETNDD NL  DGS SK +S REVVTPLAH++YADQLEQ
Sbjct: 240  ------------NVPSSGTLGDETNDD-NLVIDGSESKKKSSREVVTPLAHLSYADQLEQ 286

Query: 962  KKSSLMQILKRLTRNARKACPTGVPLPEWILKSRE 1066
            KK SLMQILK+L RNARKACP GV +PEWILKSRE
Sbjct: 287  KKYSLMQILKKLPRNARKACPNGVSVPEWILKSRE 321


>ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containing protein 24-like [Vitis
            vinifera]
          Length = 843

 Score =  340 bits (872), Expect = 4e-91
 Identities = 191/334 (57%), Positives = 231/334 (69%), Gaps = 11/334 (3%)
 Frame = +2

Query: 98   KTLDP-INAQDSTSEPNLTAPQGA---QITEVNDDVVPTEKRKRDDGDGDAERSLHPLWK 265
            +TL+P IN  D+   P            + +  D +   EKRKR D   D++   HPLWK
Sbjct: 13   QTLNPSINGNDAPCPPQEHVGDEELKPSVPQSTDVIESGEKRKRSD-PADSDNCRHPLWK 71

Query: 266  TSLCSYFRSHNGTCSHGDECRYAHGEEELRPRPDNTWDPTSERAKKALKSETGERC-AVT 442
            TSLCSYFRSH+G+CSHGD CRYAHGEEELR RPDNTWDPTSERAKK LKSE+GE+C +  
Sbjct: 72   TSLCSYFRSHSGSCSHGDACRYAHGEEELRQRPDNTWDPTSERAKKLLKSESGEKCDSKE 131

Query: 443  EGVMMTEAXXXXXXXXXXXXCASNHALSKCLVHLQRNWSSENLRNFLNDEGIPFKHAKKK 622
            + VMMTEA            CA +  LSKCL+HL   W S+ LR+FL  +G+ +K AKKK
Sbjct: 132  DDVMMTEA-------VVDDDCA-DPGLSKCLLHLPPKWHSDQLRDFLGQQGVIYKSAKKK 183

Query: 623  KGMMIGFVSFEDEEQMKSSSKDLEGKSIGNKKLKVADVIPRSFEKKGNSDVGL-QSPQLN 799
            KGMMIGFV+FE  EQ+K++ ++LEGKSIGNK LKV D++PRSFEKK NS + L QS Q N
Sbjct: 184  KGMMIGFVTFESAEQLKNAMEELEGKSIGNKNLKVGDILPRSFEKKNNSALPLHQSTQKN 243

Query: 800  KENS--GVDVP-SNGALGAETNDD--NNLATDGSLSKTRSLREVVTPLAHMAYADQLEQK 964
             E +  G D   S  + G E  D   ++ A+D S+ K RS R+V TPLAH+ Y DQLE K
Sbjct: 244  METALGGDDTDVSMSSFGLEDGDAVCDSSASD-SVLKARSARDVATPLAHLTYTDQLEHK 302

Query: 965  KSSLMQILKRLTRNARKACPTGVPLPEWILKSRE 1066
            K+SLMQ LK+LTRNARKACP GV LPEWILKSRE
Sbjct: 303  KNSLMQTLKKLTRNARKACPNGVSLPEWILKSRE 336


>emb|CBI16305.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  335 bits (860), Expect = 9e-90
 Identities = 186/329 (56%), Positives = 223/329 (67%), Gaps = 6/329 (1%)
 Frame = +2

Query: 98   KTLDP-INAQDSTSEPNLTAPQGA---QITEVNDDVVPTEKRKRDDGDGDAERSLHPLWK 265
            +TL+P IN  D+   P            + +  D +   EKRKR D   D++   HPLWK
Sbjct: 13   QTLNPSINGNDAPCPPQEHVGDEELKPSVPQSTDVIESGEKRKRSD-PADSDNCRHPLWK 71

Query: 266  TSLCSYFRSHNGTCSHGDECRYAHGEEELRPRPDNTWDPTSERAKKALKSETGERC-AVT 442
            TSLCSYFRSH+G+CSHGD CRYAHGEEELR RPDNTWDPTSERAKK LKSE+GE+C +  
Sbjct: 72   TSLCSYFRSHSGSCSHGDACRYAHGEEELRQRPDNTWDPTSERAKKLLKSESGEKCDSKE 131

Query: 443  EGVMMTEAXXXXXXXXXXXXCASNHALSKCLVHLQRNWSSENLRNFLNDEGIPFKHAKKK 622
            + VMMTEA            CA +  LSKCL+HL   W S+ LR+FL  +G+ +K AKKK
Sbjct: 132  DDVMMTEA-------VVDDDCA-DPGLSKCLLHLPPKWHSDQLRDFLGQQGVIYKSAKKK 183

Query: 623  KGMMIGFVSFEDEEQMKSSSKDLEGKSIGNKKLKVADVIPRSFEKKGNSDVGL-QSPQLN 799
            KGMMIGFV+FE  EQ+K++ ++LEGKSIGNK LKV D++PRSFEKK NS + L QS Q N
Sbjct: 184  KGMMIGFVTFESAEQLKNAMEELEGKSIGNKNLKVGDILPRSFEKKNNSALPLHQSTQKN 243

Query: 800  KENSGVDVPSNGALGAETNDDNNLATDGSLSKTRSLREVVTPLAHMAYADQLEQKKSSLM 979
             E +                   LA+D S+ K RS R+V TPLAH+ Y DQLE KK+SLM
Sbjct: 244  META-------------------LASD-SVLKARSARDVATPLAHLTYTDQLEHKKNSLM 283

Query: 980  QILKRLTRNARKACPTGVPLPEWILKSRE 1066
            Q LK+LTRNARKACP GV LPEWILKSRE
Sbjct: 284  QTLKKLTRNARKACPNGVSLPEWILKSRE 312


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